BLASTX nr result
ID: Coptis21_contig00036576
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036576 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512132.1| initiation factor 5a, putative [Ricinus comm... 87 1e-15 ref|XP_002312269.1| predicted protein [Populus trichocarpa] gi|2... 87 2e-15 gb|ABK92875.1| unknown [Populus trichocarpa] 86 4e-15 ref|XP_003613950.1| Mitotic checkpoint protein bub3 [Medicago tr... 85 7e-15 ref|XP_002267447.1| PREDICTED: mitotic checkpoint protein bub3 [... 83 2e-14 >ref|XP_002512132.1| initiation factor 5a, putative [Ricinus communis] gi|223549312|gb|EEF50801.1| initiation factor 5a, putative [Ricinus communis] Length = 509 Score = 87.4 bits (215), Expect = 1e-15 Identities = 42/98 (42%), Positives = 65/98 (66%), Gaps = 1/98 (1%) Frame = +2 Query: 2 AFSIGADFRVTRHNFGVGTCQTVGYHDDLPTCVEYSQETGLAISAGLDNRLCSWDLRV-D 178 AFS G+D + R++ +G+ T+G H D+ T VEYS +T L ISAG D + WDLR+ Sbjct: 67 AFSAGSDGCLRRYDLHLGSNDTIGSHSDIATSVEYSDQTSLVISAGFDKNIMFWDLRLAK 126 Query: 179 HVEYSKYVGGEVEAMSIHGVFVVVAIGTSISIYDLRNL 292 Y + +G EV +MS+ G +++A+G S+++YDLRN+ Sbjct: 127 SPAYLRNLGAEVASMSLSGFDLMLAVGKSVNVYDLRNM 164 >ref|XP_002312269.1| predicted protein [Populus trichocarpa] gi|222852089|gb|EEE89636.1| predicted protein [Populus trichocarpa] Length = 321 Score = 86.7 bits (213), Expect = 2e-15 Identities = 41/97 (42%), Positives = 66/97 (68%), Gaps = 1/97 (1%) Frame = +2 Query: 2 AFSIGADFRVTRHNFGVGTCQTVGYHDDLPTCVEYSQETGLAISAGLDNRLCSWDLRV-D 178 AF+ +D +TR++ GT +G H D+ TCV YS ET ISAGLD ++ SWD+R+ + Sbjct: 70 AFTAASDGSITRYDLHSGTIDAIGSHQDMATCVGYSIETCQVISAGLDKKVMSWDMRLAN 129 Query: 179 HVEYSKYVGGEVEAMSIHGVFVVVAIGTSISIYDLRN 289 + + +G E++++SI G ++VA+G +++IYDLRN Sbjct: 130 PLALFRNLGAEIDSISISGFDLMVAVGAAVNIYDLRN 166 >gb|ABK92875.1| unknown [Populus trichocarpa] Length = 321 Score = 85.5 bits (210), Expect = 4e-15 Identities = 41/97 (42%), Positives = 65/97 (67%), Gaps = 1/97 (1%) Frame = +2 Query: 2 AFSIGADFRVTRHNFGVGTCQTVGYHDDLPTCVEYSQETGLAISAGLDNRLCSWDLRV-D 178 AF+ +D +TR++ GT +G H D+ TCV YS ET ISAGLD ++ SWD+R+ + Sbjct: 70 AFTAASDGSITRYDLHSGTIDAIGNHQDMATCVGYSIETCQVISAGLDKKVMSWDMRLAN 129 Query: 179 HVEYSKYVGGEVEAMSIHGVFVVVAIGTSISIYDLRN 289 + + +G E+ ++SI G ++VA+G +++IYDLRN Sbjct: 130 PLALFQNLGAEINSISISGFDLMVAVGAAVNIYDLRN 166 >ref|XP_003613950.1| Mitotic checkpoint protein bub3 [Medicago truncatula] gi|355515285|gb|AES96908.1| Mitotic checkpoint protein bub3 [Medicago truncatula] Length = 346 Score = 84.7 bits (208), Expect = 7e-15 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%) Frame = +2 Query: 2 AFSIGADFRVTRHNFGVGTCQTVGYHDDLPTCVEYSQETGLAISAGLDNRLCSWDLRVDH 181 AFS+ +D + R++ G +G HDD+ TC+ YS ET L I++G D +L SWD+R Sbjct: 74 AFSVASDGFIRRYDLHSGIVDPMGSHDDMATCIGYSNETCLLITSGFDKKLLSWDIRTKK 133 Query: 182 V-EYSKYVGGEVEAMSIHGVFVVVAIGTSISIYDLRN 289 S + E+++MS+ G V V IG S+ +YDLRN Sbjct: 134 AFSLSMSLDAEIDSMSVSGFMVTVGIGASVHVYDLRN 170 >ref|XP_002267447.1| PREDICTED: mitotic checkpoint protein bub3 [Vitis vinifera] gi|296083003|emb|CBI22304.3| unnamed protein product [Vitis vinifera] Length = 327 Score = 83.2 bits (204), Expect = 2e-14 Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 1/99 (1%) Frame = +2 Query: 2 AFSIGADFRVTRHNFGVGTCQTVGYHDDLPTCVEYSQETGLAISAGLDNRLCSWDLRVDH 181 AFS G+D V R++ G T+G HDDL TCVEY ET +SAG DN++ WD R+ Sbjct: 68 AFSAGSDCYVRRYDLHSGIQDTIGNHDDLATCVEYCDETCQVVSAGWDNKIMLWDTRMKK 127 Query: 182 VE-YSKYVGGEVEAMSIHGVFVVVAIGTSISIYDLRNLK 295 K +G EVE+MS+ ++V+ G S++ YDLR L+ Sbjct: 128 APGCVKILGAEVESMSLSVFNLLVSAGASVNTYDLRMLE 166