BLASTX nr result

ID: Coptis21_contig00036559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036559
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527799.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_002515665.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002527799.1| conserved hypothetical protein [Ricinus communis]
           gi|223532834|gb|EEF34609.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = +1

Query: 133 FLAFCRHHRKNRAFYAKRIPCNVVMMNSDGEMDILNKLPMIDKGDNTPGDSPA 291
           ++ F RH +K+R F+AKRIPCN+V+MN +GE D++   PMID G+ TPG+SPA
Sbjct: 159 WVIFDRHQKKDREFFAKRIPCNMVVMNENGEADMIRGQPMIDNGEFTPGESPA 211


>ref|XP_002515665.1| conserved hypothetical protein [Ricinus communis]
           gi|223545208|gb|EEF46717.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 36/52 (69%)
 Frame = +1

Query: 133 FLAFCRHHRKNRAFYAKRIPCNVVMMNSDGEMDILNKLPMIDKGDNTPGDSP 288
           F+   RH RKN+AF+A+R+P +VVMM S G++D+L     ID  + TPG SP
Sbjct: 174 FVVLDRHLRKNKAFFAQRLPSSVVMMKSGGDVDMLKIRSSIDSSELTPGKSP 225


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