BLASTX nr result

ID: Coptis21_contig00036558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036558
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632121.1| PREDICTED: uncharacterized protein LOC100853...   100   3e-19
emb|CAN65091.1| hypothetical protein VITISV_035036 [Vitis vinifera]    98   1e-18
ref|XP_002523948.1| conserved hypothetical protein [Ricinus comm...    72   1e-10

>ref|XP_003632121.1| PREDICTED: uncharacterized protein LOC100853672 [Vitis vinifera]
          Length = 828

 Score =  100 bits (249), Expect = 3e-19
 Identities = 62/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
 Frame = -2

Query: 579 IHDIGMPPCGNHVELPINLKGIKDHFSHSKRERLIEEECMPLDAHVCQVDNYFSAEANHY 400
           + DI M P GN +ELP    GI+D FS+ K+      + M    H  ++   F  E   Y
Sbjct: 246 MQDINMSPSGNSLELPFYPMGIEDPFSNPKQGVSTFRDFMHHGGHSSKIRRSFGDEETFY 305

Query: 399 -INDENERLWK------------------AWKNQAYDMDSIYVDFSMDSTEDVSDFTFED 277
            I D+NE +W                   +WK+    MD    DF      ++ DFT E 
Sbjct: 306 NIKDKNENIWNGSVGFPDYNSPDDWECDLSWKHWPGQMDGTSADFVKTGNHELLDFTSEG 365

Query: 276 PYLTNKRDVAKGLGDFNILDFPASYHKHQASQKEQDFININAKR*FKFAGSWDF----NR 109
             ++ KR+  K    FNI D  A Y +HQ S+ + DF   +  R       W F    N+
Sbjct: 366 HCISKKRNAMKARDRFNISDLSAPYLRHQTSENDHDFATSDGTRSPMLGRIWGFTGVNNQ 425

Query: 108 PTWPSFAAEDAKDN 67
           P WPSFA ED++D+
Sbjct: 426 PDWPSFATEDSRDS 439


>emb|CAN65091.1| hypothetical protein VITISV_035036 [Vitis vinifera]
          Length = 795

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 20/183 (10%)
 Frame = -2

Query: 654 KPVRRYQSSKNLHYV-NDFEFEVNAMIHDIGMPPCGNHVELPINLKGIKDHFSHSKRERL 478
           K  R+ +SSKNL++V +D E EV + + DI M P GN +ELP    GI+D FS+ K+   
Sbjct: 224 KDARQLRSSKNLNFVLDDLEVEVGSKMQDINMSPSGNSLELPFYPMGIEDPFSNPKQGVS 283

Query: 477 IEEECMPLDAHVCQVDNYFSAEANHY-INDENERLWK------------------AWKNQ 355
              + M    H  ++   F  E   Y I D+NE +W                   +WK+ 
Sbjct: 284 TFRDFMHXGGHSSKIRXSFGDEETFYNIKDKNENIWNGSVGFPDYNSPDDWECDXSWKHW 343

Query: 354 AYDMDSIYVDFSMDSTEDVSDFTFEDPYLTNKRDVAKGLGDFNILDFPASYHKHQASQKE 175
              MD    DF      ++ DFT E   ++ KR+  K    FNI D  A Y +HQ S+ +
Sbjct: 344 PGQMDGTSADFVKTGNHELLDFTSEGHCISKKRNAMKARDRFNISDLSAPYLRHQTSEND 403

Query: 174 QDF 166
            DF
Sbjct: 404 HDF 406


>ref|XP_002523948.1| conserved hypothetical protein [Ricinus communis]
           gi|223536795|gb|EEF38435.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 364

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 65/243 (26%), Positives = 97/243 (39%), Gaps = 28/243 (11%)
 Frame = -2

Query: 660 PPKPVRRYQSSKNL-HYVNDFEFEVNAMIHDIGMPPCGNHVE-----------LPINLKG 517
           P K  R+  SS+N  H +ND E EV+A++ D+ MP  G+ ++           L  N   
Sbjct: 123 PLKAARQLNSSRNCDHVLNDLELEVDAIMQDLEMPLSGSSLDFSTGTNDSYDKLEANFPA 182

Query: 516 IKDHFSHSKRERLIEEECMPLDAHVCQVDNY-------FSAEANHYINDEN-ERLWKAWK 361
           ++DH         I        A     +NY       FS  A   +++   +  WK+W 
Sbjct: 183 VRDHMQLDGHNSKIRSSLSYRQAFCDTRNNYEDLWDDRFSLLAAESLDERQCDISWKSWS 242

Query: 360 NQAYDMDSIYVDFSMDSTEDVS----DFTFEDPYLTNKRDVAKGLGDFNILDFPASYHKH 193
                       F  DS+E +     ++ F  P L  KRD AK    FN LD  +S  KH
Sbjct: 243 ----------CHFDGDSSESLKHGKPNYAFGGPQLLKKRDAAKATTGFNFLD--SSPTKH 290

Query: 192 QASQKEQDFININAKR*FKFAGSWDF----NRPTWPSFAAEDAKDNTXXXXXXXXXXSAV 25
           Q S+ + D       R    A + +F      P W SF  ED + +           +AV
Sbjct: 291 QKSENDYDVTTSKGARHHLVATNGNFEDVTGHPDWSSFVLEDPRKSPSLLSEESCSSTAV 350

Query: 24  KGD 16
           +G+
Sbjct: 351 RGE 353


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