BLASTX nr result

ID: Coptis21_contig00036533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036533
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30183.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_002519431.1| protein with unknown function [Ricinus commu...    80   2e-13
ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>emb|CBI30183.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/71 (64%), Positives = 57/71 (80%), Gaps = 2/71 (2%)
 Frame = -3

Query: 388 IKRKGDATFIFGSNNEVAMDRGEGMSRK-ISKEEEQLREGTQHQIYPPTHSPPPNS-RRR 215
           IKR GDA+F   + NE+AM+RGEG+SR+  S++E++LREG Q  IYPPT  PPP+S RRR
Sbjct: 134 IKRNGDASFSLEAKNEMAMERGEGISRRESSRDEDELREGLQQDIYPPTPPPPPSSARRR 193

Query: 214 KGIPHRAPFGS 182
           KGIPHRAPF S
Sbjct: 194 KGIPHRAPFAS 204


>ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|222833590|gb|EEE72067.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/70 (64%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -3

Query: 388 IKRKGDATFIFGSNNEVAMDRGEGMSRKISKEEEQLREGTQHQIYPPTHSPPPNS-RRRK 212
           +KR GDA+F   + NE  M R EG    IS EEE LREG+Q  IYPPT  PPP+S RRRK
Sbjct: 137 VKRNGDASFTLEAKNEALMGRREG----ISGEEEDLREGSQQDIYPPTPPPPPSSARRRK 192

Query: 211 GIPHRAPFGS 182
           GIPHRAPFGS
Sbjct: 193 GIPHRAPFGS 202


>ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|222845422|gb|EEE82969.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = -3

Query: 391 RIKRKGDATFIFGSNNEVAMDRGEGMSRKI-SKEEEQLREGTQHQIYPPTHSPP-PNSRR 218
           RIK  GDATF   + +E   +  EGM R++ SKEEE+LREG+Q  +Y  T +PP  NSRR
Sbjct: 138 RIKNNGDATFNLSTKDEEVGEMREGMGRRLPSKEEEELREGSQQDMYTSTLTPPHSNSRR 197

Query: 217 RKGIPHRAPFGS 182
           RKGIPHRAPFGS
Sbjct: 198 RKGIPHRAPFGS 209


>ref|XP_002519431.1| protein with unknown function [Ricinus communis]
           gi|223541294|gb|EEF42845.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
 Frame = -3

Query: 388 IKRKGDATF-IFGSNNEVAMDRGEGMSRKI---SKEEEQLREGTQHQIYPPTHSPPPNS- 224
           IKR GDA+F +   N E  M+R EG++ +I    +E+E+LREG+Q  IYPPT  PPP S 
Sbjct: 134 IKRNGDASFSLEAKNEEELMERREGITSRIVVSRREDEELREGSQQDIYPPTPPPPPTSS 193

Query: 223 -RRRKGIPHRAPFGS 182
            RRRKGIPHRAPF S
Sbjct: 194 ARRRKGIPHRAPFKS 208


>ref|XP_002322906.1| predicted protein [Populus trichocarpa] gi|222867536|gb|EEF04667.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
 Frame = -3

Query: 388 IKRKGDATFIFGSNNEVAMDRGEGMSRKISKEEEQLREGTQHQ--IYPPTHSPPPNS-RR 218
           +KR G+A+F   + NE  M+R EG+SR     EE+LREG+Q Q  IYPPT  PP +S RR
Sbjct: 134 VKRNGEASFTIEAKNEALMERREGISRG----EEELREGSQQQQDIYPPTPPPPSSSARR 189

Query: 217 RKGIPHRAPFGS 182
           RKGIPHRAPFGS
Sbjct: 190 RKGIPHRAPFGS 201


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