BLASTX nr result

ID: Coptis21_contig00036530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036530
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309970.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|NP_001237692.1| uncharacterized protein LOC100306366 precurs...   103   2e-20
ref|XP_003601935.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    99   5e-19
ref|XP_002306302.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
gb|ADE76877.1| unknown [Picea sitchensis]                              96   4e-18

>ref|XP_002309970.1| predicted protein [Populus trichocarpa] gi|222852873|gb|EEE90420.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
 Frame = +2

Query: 11  QPPSTLQQGVVTEEKMRLGSRPPSCYNRCSECHPCMAVQVPTTPIQPGNGPLVPLNKHDK 190
           QPP    +G   EEK RLGS PPSC+N+C+ CHPCMAVQVPT P Q  N P  P++    
Sbjct: 32  QPPIASHEGAAFEEKARLGSTPPSCHNKCNGCHPCMAVQVPTLPNQ--NRPAQPVSTKTS 89

Query: 191 FLS------STTSKKYTNYKPLGWKCRCGNRLFNP 277
            +          + +Y+NYKPLGWKCRCG+  +NP
Sbjct: 90  IIDPFFDPYPAGNNRYSNYKPLGWKCRCGDHFYNP 124


>ref|NP_001237692.1| uncharacterized protein LOC100306366 precursor [Glycine max]
           gi|255628317|gb|ACU14503.1| unknown [Glycine max]
          Length = 127

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
 Frame = +2

Query: 5   HQQPPSTLQQGVVTEEKMRLGSRPPSCYNRCSECHPCMAVQVPTTPIQPGNGP-LVPLNK 181
           H QP  + ++ ++ EEK RLGS PPSC+N+C++CHPCMAVQVPT P    N P L     
Sbjct: 35  HPQPAISTRE-LLFEEKNRLGSIPPSCHNKCNDCHPCMAVQVPTLPSHDSNPPDLTKTAA 93

Query: 182 HDKFL--SSTTSKKYTNYKPLGWKCRCGNRLFNP 277
              FL  SS    +Y+NYKPLGWKC CG+  FNP
Sbjct: 94  MATFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 127


>ref|XP_003601935.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355490983|gb|AES72186.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 121

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   FHQQPPSTLQQGVVTEEKMRLGSRPPSCYNRCSECHPCMAVQVPT-TPIQPGNGPLVPLN 178
           F+Q   +   +G++ EEK RLGS PP+C+N+C++CHPCMAVQVP+   +QPG+       
Sbjct: 29  FYQPHSAIPPRGLLFEEKNRLGSAPPTCHNKCNQCHPCMAVQVPSHEHVQPGHTASTSST 88

Query: 179 KHDKFLSSTTSKKYTNYKPLGWKCRCGNRLFNP 277
           +   F     +  Y+NYKPL WKC CG   FNP
Sbjct: 89  EGVNFFLQGNNNGYSNYKPLSWKCHCGGNFFNP 121


>ref|XP_002306302.1| predicted protein [Populus trichocarpa] gi|222855751|gb|EEE93298.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 46/94 (48%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
 Frame = +2

Query: 5   HQQPPSTLQQGVVTEEKMRLGSRPPSCYNRCSECHPCMAVQVPTTPIQ--PGNGPLVPLN 178
           H QPP T  QG+  EEK RLGS PPSC+N+C+ CHPC+AVQVP  P Q  P        +
Sbjct: 34  HLQPP-TSPQGIAFEEKARLGSTPPSCHNKCNGCHPCIAVQVPALPSQNEPVQMGSAKTS 92

Query: 179 KHDKFLSS-TTSKKYTNYKPLGWKCRCGNRLFNP 277
             D+F  S     ++ +Y+PLGWKCRC +  +NP
Sbjct: 93  SIDEFFDSYPAGNRFPDYRPLGWKCRCADHFYNP 126


>gb|ADE76877.1| unknown [Picea sitchensis]
          Length = 111

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/77 (57%), Positives = 52/77 (67%)
 Frame = +2

Query: 47  EEKMRLGSRPPSCYNRCSECHPCMAVQVPTTPIQPGNGPLVPLNKHDKFLSSTTSKKYTN 226
           E+  RLGS PPSC N+C+ C+PC A+QVPT P    N   V         S+  SKKYTN
Sbjct: 39  EDMTRLGSIPPSCRNKCNACNPCKAIQVPTLP----NHDQVHKVSQRPSPSTEASKKYTN 94

Query: 227 YKPLGWKCRCGNRLFNP 277
           YKP+GWKC+CGNRLFNP
Sbjct: 95  YKPIGWKCKCGNRLFNP 111


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