BLASTX nr result

ID: Coptis21_contig00036502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036502
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313799.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
gb|AAS21023.1| coatomer protein gamma subunit [Hyacinthus orient...   104   7e-21
ref|XP_002509477.1| coatomer gamma subunit, putative [Ricinus co...   104   8e-21
ref|XP_002305424.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21
ref|XP_004148851.1| PREDICTED: coatomer subunit gamma-like [Cucu...   102   3e-20

>ref|XP_002313799.1| predicted protein [Populus trichocarpa] gi|222850207|gb|EEE87754.1|
           predicted protein [Populus trichocarpa]
          Length = 886

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/69 (78%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 TNTIPEQLLENVTVIVDSSEAHDFYQVASKPLKTLPYGSTGQTFVAFEKPKGV-LLGKFS 29
           TNTIPEQLLENV+VIVDSSEA +F +VASKPL++LPY + GQTFVAFEKPKG+  +GKFS
Sbjct: 674 TNTIPEQLLENVSVIVDSSEADNFAEVASKPLRSLPYDTPGQTFVAFEKPKGITAVGKFS 733

Query: 28  NSLRFIVKE 2
           N+LRFIVKE
Sbjct: 734 NTLRFIVKE 742


>gb|AAS21023.1| coatomer protein gamma subunit [Hyacinthus orientalis]
          Length = 290

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/69 (76%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 TNTIPEQLLENVTVIVDSSEAHDFYQVASKPLKTLPYGSTGQTFVAFEKPKGV-LLGKFS 29
           TNTIPEQLLENVT+ VD+SEA +F +VASKPLKTLPY S GQ+FVAFEKP GV  +GKFS
Sbjct: 92  TNTIPEQLLENVTIFVDASEAEEFSEVASKPLKTLPYDSPGQSFVAFEKPAGVPAVGKFS 151

Query: 28  NSLRFIVKE 2
           N L+FIVKE
Sbjct: 152 NMLKFIVKE 160


>ref|XP_002509477.1| coatomer gamma subunit, putative [Ricinus communis]
           gi|223549376|gb|EEF50864.1| coatomer gamma subunit,
           putative [Ricinus communis]
          Length = 887

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/69 (76%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 TNTIPEQLLENVTVIVDSSEAHDFYQVASKPLKTLPYGSTGQTFVAFEKPKGV-LLGKFS 29
           TNT+PEQLLENVTV+VD+SEA DF +VASKPL++LPY S GQTFVAFEK +GV  +GKFS
Sbjct: 675 TNTVPEQLLENVTVVVDASEAEDFAEVASKPLRSLPYDSPGQTFVAFEKLEGVPAVGKFS 734

Query: 28  NSLRFIVKE 2
           N LRFIVKE
Sbjct: 735 NMLRFIVKE 743


>ref|XP_002305424.1| predicted protein [Populus trichocarpa] gi|222848388|gb|EEE85935.1|
           predicted protein [Populus trichocarpa]
          Length = 885

 Score =  104 bits (259), Expect = 8e-21
 Identities = 52/69 (75%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 TNTIPEQLLENVTVIVDSSEAHDFYQVASKPLKTLPYGSTGQTFVAFEKPKGV-LLGKFS 29
           TNTIPEQLLENV+VIVD+SEA DF +VASKPL++LPY + GQTFVAFEKP+G+  +GKF+
Sbjct: 673 TNTIPEQLLENVSVIVDASEADDFAEVASKPLRSLPYDTPGQTFVAFEKPEGITTVGKFT 732

Query: 28  NSLRFIVKE 2
           N LRFIVKE
Sbjct: 733 NMLRFIVKE 741


>ref|XP_004148851.1| PREDICTED: coatomer subunit gamma-like [Cucumis sativus]
           gi|449521321|ref|XP_004167678.1| PREDICTED: coatomer
           subunit gamma-like [Cucumis sativus]
          Length = 887

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/69 (75%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 TNTIPEQLLENVTVIVDSSEAHDFYQVASKPLKTLPYGSTGQTFVAFEKPKGV-LLGKFS 29
           TNTIPEQLLENV VIVD+SEA +F +V SKPL++LPY S GQTFVAFEKP GV  +GKFS
Sbjct: 675 TNTIPEQLLENVNVIVDASEAEEFSEVVSKPLRSLPYNSPGQTFVAFEKPDGVAAVGKFS 734

Query: 28  NSLRFIVKE 2
           N L+FIVKE
Sbjct: 735 NMLKFIVKE 743


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