BLASTX nr result

ID: Coptis21_contig00036470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036470
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299810.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002525642.1| kinase, putative [Ricinus communis] gi|22353...    92   4e-17
gb|AFN53669.1| hypothetical protein [Linum usitatissimum]              91   7e-17
emb|CBI15956.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002278579.1| PREDICTED: uncharacterized protein LOC100262...    91   1e-16

>ref|XP_002299810.1| predicted protein [Populus trichocarpa] gi|222847068|gb|EEE84615.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
 Frame = -2

Query: 238 DNKVIAETLGGAASFVSNVLDGLSINCNYITKVGYDFSYSVSHIPIVSENLKTTLFHAYF 59
           +N V A +LGGAASF+SNV +GLS++CN ++KVG DF Y+VS+ PIV   LKTT+FH+YF
Sbjct: 16  NNAVKAVSLGGAASFISNVFNGLSVSCNLVSKVGEDFKYTVSYTPIVIPTLKTTVFHSYF 75

Query: 58  SSVPDLNGN-NQDRVLERV 5
              P L+GN +QDR+L+RV
Sbjct: 76  D--PGLHGNDHQDRILKRV 92


>ref|XP_002525642.1| kinase, putative [Ricinus communis] gi|223535078|gb|EEF36760.1|
           kinase, putative [Ricinus communis]
          Length = 358

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/79 (59%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = -2

Query: 238 DNKVIAETLGGAASFVSNVLDGLSINCNYITKVGYDFSYSVSHIPIVSENLKTTLFHAYF 59
           D+ V+ E+LGGA+SF++ VL+GLS+ CN I+KVG DF Y VSH PIV  + KTT FHAYF
Sbjct: 30  DDIVLGESLGGASSFIAAVLNGLSVPCNLISKVGNDFKYQVSHTPIVISSSKTTTFHAYF 89

Query: 58  SSVPDLNGN-NQDRVLERV 5
            S   ++ N NQDRVL+RV
Sbjct: 90  DSPGVVHENGNQDRVLKRV 108


>gb|AFN53669.1| hypothetical protein [Linum usitatissimum]
          Length = 301

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
 Frame = -2

Query: 238 DNKVIAETLGGAASFVSNVLDGLSINCNYITKVGYDFSYSVSHIPIVSENLKTTLFHAYF 59
           D+ V AE+LGGAASF+SNV +G+SI C  ++KVG DF Y VSH PIVS + KTT+FHAYF
Sbjct: 27  DSTVKAESLGGAASFISNVFNGMSIPCTLVSKVGDDFRYPVSHPPIVSPDAKTTVFHAYF 86

Query: 58  --SSVPDLNGNNQDRVLERV 5
              S P    N  DR+L+R+
Sbjct: 87  DSGSQPGGTNNRPDRILKRI 106


>emb|CBI15956.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/75 (62%), Positives = 57/75 (76%)
 Frame = -2

Query: 229 VIAETLGGAASFVSNVLDGLSINCNYITKVGYDFSYSVSHIPIVSENLKTTLFHAYFSSV 50
           V+ ETLGGAASF+SNVLDG+SI C+ ++KVG DF+YSV+H PIV     TTLFHA+F S 
Sbjct: 112 VVGETLGGAASFISNVLDGVSIRCDLVSKVGSDFAYSVAHPPIVVPTSPTTLFHAFFDSG 171

Query: 49  PDLNGNNQDRVLERV 5
            D  G   DRVL+RV
Sbjct: 172 SDGEG-ACDRVLKRV 185


>ref|XP_002278579.1| PREDICTED: uncharacterized protein LOC100262214 [Vitis vinifera]
          Length = 381

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/75 (62%), Positives = 57/75 (76%)
 Frame = -2

Query: 229 VIAETLGGAASFVSNVLDGLSINCNYITKVGYDFSYSVSHIPIVSENLKTTLFHAYFSSV 50
           V+ ETLGGAASF+SNVLDG+SI C+ ++KVG DF+YSV+H PIV     TTLFHA+F S 
Sbjct: 31  VVGETLGGAASFISNVLDGVSIRCDLVSKVGSDFAYSVAHPPIVVPTSPTTLFHAFFDSG 90

Query: 49  PDLNGNNQDRVLERV 5
            D  G   DRVL+RV
Sbjct: 91  SDGEG-ACDRVLKRV 104


Top