BLASTX nr result

ID: Coptis21_contig00036459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036459
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137556.1| PREDICTED: uncharacterized protein LOC101212...    92   6e-17
ref|XP_002313626.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002528807.1| kinesin, putative [Ricinus communis] gi|2235...    85   5e-15
ref|XP_002273307.2| PREDICTED: uncharacterized protein LOC100266...    77   2e-12
ref|NP_189991.2| kinesin motor protein-like protein [Arabidopsis...    76   2e-12

>ref|XP_004137556.1| PREDICTED: uncharacterized protein LOC101212777 [Cucumis sativus]
            gi|449519232|ref|XP_004166639.1| PREDICTED:
            uncharacterized LOC101212777 [Cucumis sativus]
          Length = 1375

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/93 (47%), Positives = 65/93 (69%)
 Frame = -3

Query: 281  KLSFVLKEIEDRKRKSKKFEADIEAVEGVILTGMHSVKEMELAYQTVIEEREVLKEMSES 102
            KL  + KE+ED  RKSKK + DIE+++  +     SV EMELA+Q VI E+  L E  + 
Sbjct: 1218 KLGVIRKELEDLTRKSKKVDTDIESIQLEVQKASKSVDEMELAFQGVINEKNTLLETRDV 1277

Query: 101  GIDEVQKLIVECHQCVFESDLKDREIEILEQEV 3
            GI+E + +I+EC +C+FE+ LK+ EI+ILE+E+
Sbjct: 1278 GIEEFENIILECQECMFEAGLKEAEIKILEEEL 1310


>ref|XP_002313626.1| predicted protein [Populus trichocarpa] gi|222850034|gb|EEE87581.1|
            predicted protein [Populus trichocarpa]
          Length = 1235

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/93 (47%), Positives = 68/93 (73%)
 Frame = -3

Query: 281  KLSFVLKEIEDRKRKSKKFEADIEAVEGVILTGMHSVKEMELAYQTVIEEREVLKEMSES 102
            KL  V +E +D  ++  K E++I+AV+  I  G  SV+EMELA QTVI E+E L E++E+
Sbjct: 1103 KLGLVKREFDDLSKRLDKIESEIQAVQMDIQKGSKSVEEMELALQTVIHEKETLLEITEN 1162

Query: 101  GIDEVQKLIVECHQCVFESDLKDREIEILEQEV 3
            G+ E+Q +I+E  QCVF++DLK+ E++ LE+E+
Sbjct: 1163 GMSEIQSMILEYQQCVFDTDLKEAELKTLEEEL 1195


>ref|XP_002528807.1| kinesin, putative [Ricinus communis] gi|223531760|gb|EEF33580.1|
            kinesin, putative [Ricinus communis]
          Length = 1381

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/93 (45%), Positives = 65/93 (69%)
 Frame = -3

Query: 281  KLSFVLKEIEDRKRKSKKFEADIEAVEGVILTGMHSVKEMELAYQTVIEEREVLKEMSES 102
            KL  + +EI+D  RKS K + +I+AV+  I  G  ++ E+ELA Q V++E+E L EM E+
Sbjct: 1227 KLGIITREIDDLSRKSGKIDNEIQAVKTDIQKGSRALAELELALQGVVQEKETLLEMGEN 1286

Query: 101  GIDEVQKLIVECHQCVFESDLKDREIEILEQEV 3
            GI E+Q +I+E  Q VF+ DLK+ EI+ +E+E+
Sbjct: 1287 GICEIQDMILEYQQNVFDKDLKEEEIKTMEEEL 1319


>ref|XP_002273307.2| PREDICTED: uncharacterized protein LOC100266768 [Vitis vinifera]
          Length = 1361

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/93 (44%), Positives = 60/93 (64%)
 Frame = -3

Query: 281  KLSFVLKEIEDRKRKSKKFEADIEAVEGVILTGMHSVKEMELAYQTVIEEREVLKEMSES 102
            KL  V +EIED  RKS+K E  ++ VE  +   + SV+E +L  Q ++ E E+L E+ ES
Sbjct: 1206 KLGAVRREIEDLNRKSQKVETAMQTVEMEMQKSLKSVEETQLGLQGIVRENEMLLEIRES 1265

Query: 101  GIDEVQKLIVECHQCVFESDLKDREIEILEQEV 3
            G  E+  LI+E  Q +FE+DLK  E+ ILE+E+
Sbjct: 1266 GKTEIDNLILEYQQSMFEADLKLAEMSILEEEL 1298


>ref|NP_189991.2| kinesin motor protein-like protein [Arabidopsis thaliana]
            gi|332644335|gb|AEE77856.1| kinesin motor protein-like
            protein [Arabidopsis thaliana]
          Length = 1263

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/93 (38%), Positives = 59/93 (63%)
 Frame = -3

Query: 281  KLSFVLKEIEDRKRKSKKFEADIEAVEGVILTGMHSVKEMELAYQTVIEEREVLKEMSES 102
            KL+ V KE++D  +KS K E +I+ +E  I     +  E E+  +  I+E++ ++EM E 
Sbjct: 1113 KLASVRKEVDDMTKKSLKLEKEIKTMETEIEKSSKTRTESEMELENTIQEKQTIQEMEEQ 1172

Query: 101  GIDEVQKLIVECHQCVFESDLKDREIEILEQEV 3
            G+ E+Q +I+E HQ VFESDL+  E  I+ +E+
Sbjct: 1173 GMSEIQNMIIEIHQLVFESDLRKEEAMIIREEL 1205


Top