BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036425
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  149   2e-34
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   139   3e-31
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   138   6e-31
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...   135   3e-30
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   135   4e-30

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/175 (40%), Positives = 110/175 (62%)
 Frame = +3

Query: 3   PCQSAFILGKSIQDSILLSHELLHNYHRDENPSRMAAKIDLRKAYDSVRREAVEFALNRV 182
           P Q AF+ G+ + +++LL+ EL+H Y+R     R   KIDLRKA+D+V  E +   +  +
Sbjct: 7   PNQGAFLEGRLMVENVLLATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIMQAL 66

Query: 183 GIPTRLVAWVMACIQDAH*SIMINGAPHGCFKGKRGICQGDPLSPYLFVLVMEMFAELMI 362
            +P   V WV  C++    S+ ING   G FKG+RG+ QGDPLSPYLF++ ME+ + ++ 
Sbjct: 67  NLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLD 126

Query: 363 HSVTVGDYKLHHRCQNPVITHLSFADDLIAFMHGDLITVMTLRDTLKLFSGCTGL 527
                    LH +C +PVITHL+FADD++ F  G+  +++ +++TL  FS  +GL
Sbjct: 127 RCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGL 181


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/175 (38%), Positives = 107/175 (61%)
 Frame = +3

Query: 3    PCQSAFILGKSIQDSILLSHELLHNYHRDENPSRMAAKIDLRKAYDSVRREAVEFALNRV 182
            P QSAF+ G+ + +++LL+ E++H Y+     SR   K+DLRKA+DSVR + +  A   +
Sbjct: 555  PSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRAL 614

Query: 183  GIPTRLVAWVMACIQDAH*SIMINGAPHGCFKGKRGICQGDPLSPYLFVLVMEMFAELMI 362
             +P + V W+  CI   + S+M+NG+  G FK  +G+ QGDPLSPYLFVL ME+F+ L+ 
Sbjct: 615  AVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLK 674

Query: 363  HSVTVGDYKLHHRCQNPVITHLSFADDLIAFMHGDLITVMTLRDTLKLFSGCTGL 527
                 G  + H +  +  I+HL FADD++ F  G   ++  + + L  F+  +GL
Sbjct: 675  ARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGL 729


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  138 bits (347), Expect = 6e-31
 Identities = 68/175 (38%), Positives = 106/175 (60%)
 Frame = +3

Query: 3    PCQSAFILGKSIQDSILLSHELLHNYHRDENPSRMAAKIDLRKAYDSVRREAVEFALNRV 182
            P QSAF+ G+ + +++LL+ E++H Y+     SR   K+DLRKA+DSVR + +  A   +
Sbjct: 555  PSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRAL 614

Query: 183  GIPTRLVAWVMACIQDAH*SIMINGAPHGCFKGKRGICQGDPLSPYLFVLVMEMFAELMI 362
             +P + V W+  CI   + S+M+NG+  G FK  +G+ QGDPLSPYLFVL ME+F+ L+ 
Sbjct: 615  AVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLK 674

Query: 363  HSVTVGDYKLHHRCQNPVITHLSFADDLIAFMHGDLITVMTLRDTLKLFSGCTGL 527
                 G    H +  +  I+HL FADD++ F  G   ++  + + L  F+  +GL
Sbjct: 675  ARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGL 729


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
            putative protein [Arabidopsis thaliana]
          Length = 1141

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/175 (39%), Positives = 109/175 (62%)
 Frame = +3

Query: 3    PCQSAFILGKSIQDSILLSHELLHNYHRDENPSRMAAKIDLRKAYDSVRREAVEFALNRV 182
            P QSAF+ G+ + +++LL+ E++H Y+      R   K+DLRKA+DSVR E +  AL  +
Sbjct: 532  PSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKVDLRKAFDSVRWEFIIAALLAL 591

Query: 183  GIPTRLVAWVMACIQDAH*SIMINGAPHGCFKGKRGICQGDPLSPYLFVLVMEMFAELMI 362
            G+PT+ + W+  CI     ++ +NG   G FK  +G+ QGDPLSPYLFVL ME+F++L+ 
Sbjct: 592  GVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQGDPLSPYLFVLAMEVFSKLLN 651

Query: 363  HSVTVGDYKLHHRCQNPVITHLSFADDLIAFMHGDLITVMTLRDTLKLFSGCTGL 527
                 G  + H +  +  I+HL FADD++ F  G   ++  + +TL+ F+  +GL
Sbjct: 652  SRFDSGYIRYHPKASDLSISHLMFADDVMIFFDGGSSSLHGICETLEDFASWSGL 706


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  135 bits (340), Expect = 4e-30
 Identities = 68/173 (39%), Positives = 98/173 (56%)
 Frame = +3

Query: 9    QSAFILGKSIQDSILLSHELLHNYHRDENPSRMAAKIDLRKAYDSVRREAVEFALNRVGI 188
            QS FI G+ I D+ILL+ EL+  Y R     R   K+D+RKAYDSV    +E  L   G 
Sbjct: 547  QSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGF 606

Query: 189  PTRLVAWVMACIQDAH*SIMINGAPHGCFKGKRGICQGDPLSPYLFVLVMEMFAELMIHS 368
            P+R V W+M C+     S+++NG P   F+ ++G+ QGDP+SP+LF L ME  +  +   
Sbjct: 607  PSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEEL 666

Query: 369  VTVGDYKLHHRCQNPVITHLSFADDLIAFMHGDLITVMTLRDTLKLFSGCTGL 527
                D+  H +C+   ITHL FADDL+ F   D  ++  +    + FS  +GL
Sbjct: 667  KGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGL 719