BLASTX nr result

ID: Coptis21_contig00036424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036424
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160...    98   6e-19
ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor ...    96   2e-18
emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]    96   4e-18
emb|CAX16990.1| MADS1 protein [Eschscholzia californica] gi|3431...    91   8e-17
ref|XP_002514742.1| mads box protein, putative [Ricinus communis...    89   3e-16

>emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160579|emb|CAY39418.1|
           MADS1 protein [Aristolochia fimbriata]
          Length = 349

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/99 (46%), Positives = 66/99 (66%)
 Frame = +3

Query: 3   EIDGSGQDGSAMHDLNRNACLRLQLGGQYHYPPYGLNFLLDKNMKHDGKMNMQGPPLDYQ 182
           E+D SGQ+G  +++LN N CLRLQLGGQ+ Y PY LN + +K  K +G M +    +DY 
Sbjct: 251 EMDTSGQEGGTLNELNPNECLRLQLGGQFPYEPYNLNLIDEKKFKPEGDM-LHEQSVDYH 309

Query: 183 VGTSFEPPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQQ 299
           V + FE  R  +D NHH+W S+S  C   +F++H++QQQ
Sbjct: 310 V-SGFEQSRPEYDANHHSWASTSGHCGVPMFEEHTFQQQ 347


>ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor 2A homolog [Vitis
           vinifera] gi|297733964|emb|CBI15211.3| unnamed protein
           product [Vitis vinifera]
          Length = 375

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/99 (46%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   EIDGSGQDGSAMHDLNRNACLRLQLGGQYHYPPYG-LNFLLDKNMKHDGKMNMQGPPLDY 179
           ++D  GQ+GSA++ L+ N+ LRLQL  QY Y P+G LN   +K +K + +MN+QG P+DY
Sbjct: 257 QVDEQGQEGSALNQLSGNSNLRLQLSEQYLYSPFGNLNLPDEKKLKPEMEMNLQGNPVDY 316

Query: 180 QVGTSFEPPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQ 296
           QV  +FE P   +D   HTW S+S PC+  +FD++S+ Q
Sbjct: 317 QVNGNFEIPAPIYDNRQHTWVSASGPCSIAMFDENSFSQ 355


>emb|CAN79983.1| hypothetical protein VITISV_038034 [Vitis vinifera]
          Length = 465

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 45/99 (45%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   EIDGSGQDGSAMHDLNRNACLRLQLGGQYHYPPYG-LNFLLDKNMKHDGKMNMQGPPLDY 179
           ++D  GQ+GSA++ L+ N+ LRLQL  QY Y P+G +N   +K +K + +MN+QG P+DY
Sbjct: 331 QVDEQGQEGSALNQLSGNSNLRLQLSEQYLYSPFGNMNLPDEKKLKPEMEMNLQGNPVDY 390

Query: 180 QVGTSFEPPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQ 296
           QV  +FE P   +D   HTW S+S PC+  +FD++S+ Q
Sbjct: 391 QVNGNFEIPAPIYDNRQHTWVSASGPCSIAMFDENSFSQ 429


>emb|CAX16990.1| MADS1 protein [Eschscholzia californica]
           gi|343160543|emb|CAX16991.1| MADS1 protein [Eschscholzia
           californica]
          Length = 361

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
 Frame = +3

Query: 3   EIDGSGQDG--SAMHDLNRNACLRLQLGGQYHYPPYGLNFLLDKNMKHDGKMNMQGPPLD 176
           EID SGQDG  S++ D + NACL LQ+GGQ+ Y PY  + + +   K+D +M++Q P LD
Sbjct: 250 EIDNSGQDGIGSSLPDFSANACLSLQIGGQFPYQPYDFDLVNNNKYKNDSEMSLQEPRLD 309

Query: 177 YQVG--TSFEPPRDGFDTNHHTWGSSSVPCANGIFDDHSY 290
           YQVG   SF PPR  +D +   W S+S  C+  +FD   +
Sbjct: 310 YQVGNINSFGPPRHRYDASDQAWASTSGQCSVPMFDGQPF 349


>ref|XP_002514742.1| mads box protein, putative [Ricinus communis]
           gi|223546346|gb|EEF47848.1| mads box protein, putative
           [Ricinus communis]
          Length = 363

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +3

Query: 6   IDGSGQDGSAMHDLNRNACLRLQLGGQYHYPPYG-LNFLLDKNMKHDGKMNMQGPPLDYQ 182
           +D  GQ+G A+  L+ N CL +QL  Q+ YPPY  LN    K +K + +MN QG    YQ
Sbjct: 257 VDNMGQEGGALRSLSSNTCLNVQLDEQFLYPPYSSLNLPDVKEVKPEMQMNNQGNHTVYQ 316

Query: 183 VGTSFEPPRDGFDTNHHTWGSSSVPCANGIFDDHSYQQQH 302
           V ++FE PR  +D  HHTW S+S PC+  +F+++ Y Q +
Sbjct: 317 VNSNFELPRPMYDNEHHTWFSASGPCSIAMFNENPYHQNN 356


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