BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036419
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   330   3e-88
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              330   3e-88
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   315   7e-84
ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|2...   300   2e-79
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   296   3e-78

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  330 bits (845), Expect = 3e-88
 Identities = 173/258 (67%), Positives = 198/258 (76%), Gaps = 2/258 (0%)
 Frame = -2

Query: 770  CKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQAGRTLEEARKLVEQS 591
            CKLLF G+EPLVSQFTASYGMVLNLLAGAKVTR L + +D KV QAGRTLEEARKLVEQS
Sbjct: 597  CKLLFAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQS 656

Query: 590  FGNYVGSNVMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQXX 411
            FGNYVGSNVMLAAKEEL++++KEIE L++EV++DA+D+KSRK LSEMAY EI+ LQE+  
Sbjct: 657  FGNYVGSNVMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELR 716

Query: 410  XXXXXXXXXXXXXXXXXXXXXEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDS 231
                                 + LLKE E+GHLPF CLQYKDSE VQHLV AVYLGKVDS
Sbjct: 717  AEKRLRTELRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDS 776

Query: 230  LYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDVKPSYHIALGSDNSWYLFTEKWIKT 57
              GSKVK+M+  +D F L  +  E +  D     + KPSY++ALGSDNSWYLFTEKWIKT
Sbjct: 777  FDGSKVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKT 836

Query: 56   VYRIGLPNVPLAQGDALP 3
            VYR G PNV LAQGDALP
Sbjct: 837  VYRTGFPNVALAQGDALP 854


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  330 bits (845), Expect = 3e-88
 Identities = 173/258 (67%), Positives = 198/258 (76%), Gaps = 2/258 (0%)
 Frame = -2

Query: 770  CKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQAGRTLEEARKLVEQS 591
            CKLLF G+EPLVSQFTASYGMVLNLLAGAKVTR L + +D KV QAGRTLEEARKLVEQS
Sbjct: 487  CKLLFAGVEPLVSQFTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQS 546

Query: 590  FGNYVGSNVMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQXX 411
            FGNYVGSNVMLAAKEEL++++KEIE L++EV++DA+D+KSRK LSEMAY EI+ LQE+  
Sbjct: 547  FGNYVGSNVMLAAKEELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELR 606

Query: 410  XXXXXXXXXXXXXXXXXXXXXEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDS 231
                                 + LLKE E+GHLPF CLQYKDSE VQHLV AVYLGKVDS
Sbjct: 607  AEKRLRTELRRRMELRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDS 666

Query: 230  LYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDVKPSYHIALGSDNSWYLFTEKWIKT 57
              GSKVK+M+  +D F L  +  E +  D     + KPSY++ALGSDNSWYLFTEKWIKT
Sbjct: 667  FDGSKVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKT 726

Query: 56   VYRIGLPNVPLAQGDALP 3
            VYR G PNV LAQGDALP
Sbjct: 727  VYRTGFPNVALAQGDALP 744


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  315 bits (807), Expect = 7e-84
 Identities = 166/258 (64%), Positives = 198/258 (76%), Gaps = 2/258 (0%)
 Frame = -2

Query: 770  CKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQAGRTLEEARKLVEQS 591
            CK+LF G++PLVSQFTASYGMVLNLLAGAKVTR   + D+ KVS+AGRTLEEARKL+EQS
Sbjct: 583  CKVLFSGLQPLVSQFTASYGMVLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQS 642

Query: 590  FGNYVGSNVMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQXX 411
            FGNYVGSNVMLAAKEEL++I+KEIE LT+E+SE+A+D+KS+K L++ AY+EI+ LQE+  
Sbjct: 643  FGNYVGSNVMLAAKEELARIEKEIETLTSEISEEAIDRKSQKLLAQTAYQEIAELQEELR 702

Query: 410  XXXXXXXXXXXXXXXXXXXXXEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDS 231
                                 +PLLKELEDGHLPF  L Y DS+GVQHLV+AVYLGKVD+
Sbjct: 703  AEKRLRTELRRKMELERVFSLKPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVDT 762

Query: 230  LYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDVKPSYHIALGSDNSWYLFTEKWIKT 57
            L   K+KSM+   D+F L  +   F+ GD     DVKPSYH+ALGSDNSWYLFTEKWI+ 
Sbjct: 763  LNIEKLKSMVRDYDAFALKTVVENFEVGDIGGE-DVKPSYHVALGSDNSWYLFTEKWIRM 821

Query: 56   VYRIGLPNVPLAQGDALP 3
            VYR G PNV LA GDALP
Sbjct: 822  VYRTGFPNVALALGDALP 839


>ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|222864743|gb|EEF01874.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  300 bits (769), Expect = 2e-79
 Identities = 159/258 (61%), Positives = 190/258 (73%), Gaps = 2/258 (0%)
 Frame = -2

Query: 770 CKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQAGRTLEEARKLVEQS 591
           CKLLF G+EPLVSQFTASYGMVLNLLAGAK+TR   + ++ KV QAGRTL+EARKLVE+S
Sbjct: 159 CKLLFAGLEPLVSQFTASYGMVLNLLAGAKITRRSNESNEMKVLQAGRTLKEARKLVEKS 218

Query: 590 FGNYVGSNVMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQXX 411
           FG Y+GSNVMLA+KEEL++IQKEIE LT+E S+DA+D+KSRK LS+ AY+EI+ LQEQ  
Sbjct: 219 FGTYIGSNVMLASKEELAKIQKEIEMLTSETSDDAIDRKSRKILSDGAYKEIAILQEQLR 278

Query: 410 XXXXXXXXXXXXXXXXXXXXXEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVDS 231
                                + LLKEL +  LPF CL+YKDSEGV+H V AVYLG  DS
Sbjct: 279 EEKRLRTELRRKMETKRLNALKILLKELGNDRLPFLCLKYKDSEGVEHSVPAVYLGNADS 338

Query: 230 LYGSKVKSMIDVDDSFV--LMEREFDHGDDKEHVDVKPSYHIALGSDNSWYLFTEKWIKT 57
             GSK K+M+   DS    +   E +  + + H DV+PSYH+ALGSDNSWYLFTEKWIKT
Sbjct: 339 FDGSKFKNMVSDIDSLAQNVAPIESNVSEVETHKDVEPSYHVALGSDNSWYLFTEKWIKT 398

Query: 56  VYRIGLPNVPLAQGDALP 3
           VYR GLPNV L+ GD LP
Sbjct: 399 VYRTGLPNVALSLGDDLP 416


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Glycine max]
          Length = 1162

 Score =  296 bits (758), Expect = 3e-78
 Identities = 155/259 (59%), Positives = 186/259 (71%), Gaps = 2/259 (0%)
 Frame = -2

Query: 773  GCKLLFGGIEPLVSQFTASYGMVLNLLAGAKVTRGLKDKDDSKVSQAGRTLEEARKLVEQ 594
            GCK+LF G+EPLVSQFTASYGMVLNLLAG K      + D+ K S  G+TLEEARKLVEQ
Sbjct: 585  GCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESDNMKPS-TGKTLEEARKLVEQ 643

Query: 593  SFGNYVGSNVMLAAKEELSQIQKEIEFLTTEVSEDAVDKKSRKQLSEMAYREISGLQEQX 414
            SFGNYV SNVMLAAKEE+++I+KEIEFL +E++++A+D+KSRK LS   Y+EI+ L E  
Sbjct: 644  SFGNYVSSNVMLAAKEEINKIEKEIEFLMSEITDEAIDRKSRKALSPRQYKEIAELLEDL 703

Query: 413  XXXXXXXXXXXXXXXXXXXXXXEPLLKELEDGHLPFTCLQYKDSEGVQHLVSAVYLGKVD 234
                                  +PLL+E E GHLPF CLQY+DSEGV+H + AV+LGKVD
Sbjct: 704  RAEKRVRSELRKQKEAKRISALKPLLEEPESGHLPFLCLQYRDSEGVEHSIPAVFLGKVD 763

Query: 233  SLYGSKVKSMIDVDDSFV--LMEREFDHGDDKEHVDVKPSYHIALGSDNSWYLFTEKWIK 60
            SL  SK+K MI   DSF   L + E    D +   D+KPSYH+ALGSDN+WYLFTEKWIK
Sbjct: 764  SLNASKLKDMISSVDSFALNLADAEPSVADSELKDDLKPSYHVALGSDNTWYLFTEKWIK 823

Query: 59   TVYRIGLPNVPLAQGDALP 3
            TVY  G PNVPLA+GDA P
Sbjct: 824  TVYGTGFPNVPLAEGDARP 842