BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036413
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38215.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [S...    90   2e-16
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containi...    89   4e-16

>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/99 (41%), Positives = 64/99 (64%)
 Frame = +1

Query: 1   GDVHSARRLFNEMPERNIVSWNSIIAGCAKESLFDEAXXXXXXXXXXXXXPDETTLMTII 180
           GD + AR++F EMP +N+VSWNS+I+G A++  F E+             PD+ TL+ ++
Sbjct: 254 GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVL 313

Query: 181 SVISNLGLLCLGKRIHGYVIRNEFSLDAGVGAALIDMYS 297
           +  +NLG+L LGK +H Y+ RN+   D  +G AL+DMY+
Sbjct: 314 NSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYA 352


>ref|XP_002452608.1| hypothetical protein SORBIDRAFT_04g028970 [Sorghum bicolor]
           gi|241932439|gb|EES05584.1| hypothetical protein
           SORBIDRAFT_04g028970 [Sorghum bicolor]
          Length = 485

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   GDVHSARRLFNEMPERNIVSWNSIIAGCAKESLFDEAXXXXXXXXXXXXX-PDETTLMTI 177
           GD+ +A  +F EMP+RN+VSWN+IIAG  +     EA              PDE T++  
Sbjct: 140 GDLDAAWEVFVEMPQRNVVSWNTIIAGFTRNGWAQEAVDLFVEMTVAYGLAPDEATMVGF 199

Query: 178 ISVISNLGLLCLGKRIHGYVIRNEFSLDAGVGAALIDMYS 297
           +S + ++GLL +GK  HGYV+R EFSLD  +G ALI MY+
Sbjct: 200 VSAVRDIGLLGIGKSAHGYVLRREFSLDGALGVALISMYT 239


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/99 (41%), Positives = 64/99 (64%)
 Frame = +1

Query: 1   GDVHSARRLFNEMPERNIVSWNSIIAGCAKESLFDEAXXXXXXXXXXXXXPDETTLMTII 180
           GD + AR++F EMP +N+VSWNS+I+G A++  F E+             PD+ TL+ ++
Sbjct: 276 GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVL 335

Query: 181 SVISNLGLLCLGKRIHGYVIRNEFSLDAGVGAALIDMYS 297
           +  +NLG+L LGK +H Y+ RN+   D  +G AL+DMY+
Sbjct: 336 NSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYA 374



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
 Frame = +1

Query: 7   VHSARRLFNEMPERNIVSWNSIIAGCAKESLFDEAXXXXXXXXXXXXXPDETTLMTIISV 186
           + SAR++F+  P+R++VSW ++I G  K     E               D  TL+ ++S 
Sbjct: 176 IRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSS 235

Query: 187 ISNLGLLCLGKRIHGYVIRN-EFSLDAGVGAALIDMY 294
            + LG L LG+++H Y+IRN   +LD  VG AL+DMY
Sbjct: 236 CARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMY 272


>ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|222867392|gb|EEF04523.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/99 (41%), Positives = 69/99 (69%)
 Frame = +1

Query: 1   GDVHSARRLFNEMPERNIVSWNSIIAGCAKESLFDEAXXXXXXXXXXXXXPDETTLMTII 180
           GDV SAR+LF++MPE+N+V+W+ +I+G AK S FD+A              +ET ++++I
Sbjct: 193 GDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVI 252

Query: 181 SVISNLGLLCLGKRIHGYVIRNEFSLDAGVGAALIDMYS 297
           +  ++LG L LG+R H Y++RN+ +++  +G AL+DMY+
Sbjct: 253 ASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYA 291


>ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/99 (41%), Positives = 69/99 (69%)
 Frame = +1

Query: 1   GDVHSARRLFNEMPERNIVSWNSIIAGCAKESLFDEAXXXXXXXXXXXXXPDETTLMTII 180
           GDV SAR+LF++MPE+N+V+W+++I+G A+ + FD+A              +ET ++++I
Sbjct: 199 GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVI 258

Query: 181 SVISNLGLLCLGKRIHGYVIRNEFSLDAGVGAALIDMYS 297
           S  ++LG L LG+R H YV++N  +L+  +G AL+DMY+
Sbjct: 259 SSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYA 297