BLASTX nr result

ID: Coptis21_contig00036393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036393
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]   105   3e-21
gb|AFK40012.1| unknown [Lotus japonicus]                               92   4e-17
ref|XP_002534099.1| ring finger protein, putative [Ricinus commu...    92   4e-17
ref|XP_002310548.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854...    92   6e-17

>emb|CAN65773.1| hypothetical protein VITISV_030410 [Vitis vinifera]
          Length = 269

 Score =  105 bits (263), Expect = 3e-21
 Identities = 44/76 (57%), Positives = 57/76 (75%)
 Frame = -2

Query: 264 LDSIPILAYKTEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCIDEWFFSHS 85
           L++IPIL+Y  ++G LF  DQ+ECAVCL E  + + VRLLP+C HAFH+ CIDEWF  H+
Sbjct: 70  LETIPILSYSKKKGLLFHADQSECAVCLAELEDDDXVRLLPSCHHAFHITCIDEWFVGHT 129

Query: 84  SCPTCRSPIVAPLMSS 37
           +CP CRSP+ A L  S
Sbjct: 130 NCPLCRSPVTAVLSLS 145


>gb|AFK40012.1| unknown [Lotus japonicus]
          Length = 206

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/88 (47%), Positives = 55/88 (62%)
 Frame = -2

Query: 264 LDSIPILAYKTEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCIDEWFFSHS 85
           L+ IP++ Y +       +  T+CA+CLGEF +GE VR+LP C H FHVKCID+W  SHS
Sbjct: 93  LNQIPVVVYGSGSAST-SIAATDCAICLGEFVDGEKVRVLPKCNHGFHVKCIDKWLLSHS 151

Query: 84  SCPTCRSPIVAPLMSSEISWPLRESVAD 1
           SCP CR  ++ P   SE +      VAD
Sbjct: 152 SCPNCRQSLLDPPSMSEAATVAVAVVAD 179


>ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
           gi|223525847|gb|EEF28281.1| ring finger protein,
           putative [Ricinus communis]
          Length = 344

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/81 (46%), Positives = 53/81 (65%)
 Frame = -2

Query: 264 LDSIPILAYKTEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCIDEWFFSHS 85
           +DSI +  YK +EG    ++ TEC+VCL EF E E +RLLP C HAFH+ CID W  SH 
Sbjct: 71  IDSIAVFKYKKDEG---LIEGTECSVCLNEFQEDESLRLLPKCSHAFHIPCIDTWLRSHK 127

Query: 84  SCPTCRSPIVAPLMSSEISWP 22
           +CP CR+P+++     ++  P
Sbjct: 128 NCPLCRAPVISDNFDVQVELP 148


>ref|XP_002310548.1| predicted protein [Populus trichocarpa] gi|222853451|gb|EEE90998.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/79 (48%), Positives = 54/79 (68%)
 Frame = -2

Query: 264 LDSIPILAYKTEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCIDEWFFSHS 85
           +DSI +  +K +EG    +D TEC+VCL EF E E +RLLP C HAFH+ CID W  SH 
Sbjct: 127 IDSITVFNFKKDEG---LIDGTECSVCLSEFQENESLRLLPKCSHAFHIPCIDTWLRSHK 183

Query: 84  SCPTCRSPIVAPLMSSEIS 28
           +CP CR+P+V+    ++++
Sbjct: 184 NCPLCRAPVVSDNFDAQVA 202


>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
          Length = 372

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/79 (50%), Positives = 53/79 (67%)
 Frame = -2

Query: 264 LDSIPILAYKTEEGGLFRVDQTECAVCLGEFNEGEVVRLLPNCRHAFHVKCIDEWFFSHS 85
           +D I ++ Y  EEG    ++ TEC+VCLGEF E E +RLLP C HAFHV CID W  SH 
Sbjct: 109 IDLITVIKYNKEEG---LIEGTECSVCLGEFEEDESLRLLPKCSHAFHVPCIDTWLRSHK 165

Query: 84  SCPTCRSPIVAPLMSSEIS 28
           +CP CR+PI+   + S ++
Sbjct: 166 NCPLCRAPIIHENVGSHLN 184


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