BLASTX nr result
ID: Coptis21_contig00036387
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036387 (360 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2... 95 7e-18 ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm... 84 9e-15 ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem... 82 5e-14 emb|CBI22055.3| unnamed protein product [Vitis vinifera] 82 5e-14 ref|XP_001776368.1| predicted protein [Physcomitrella patens sub... 75 7e-12 >ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1| predicted protein [Populus trichocarpa] Length = 1476 Score = 94.7 bits (234), Expect = 7e-18 Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%) Frame = +2 Query: 2 MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYA-DENNDIDEDAHVDMDLD 178 MERFLFRVKALLH+TS+GCTFWMGNLKHKDL GQVVSSQ YA D+NN++DED ++ D Sbjct: 1404 MERFLFRVKALLHSTSSGCTFWMGNLKHKDLTGQVVSSQAYADDQNNNVDEDLAEAVEED 1463 Query: 179 VAEQPLSNCS 208 QP+S S Sbjct: 1464 ---QPVSVAS 1470 >ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis] gi|223538184|gb|EEF39794.1| conserved hypothetical protein [Ricinus communis] Length = 1188 Score = 84.3 bits (207), Expect = 9e-15 Identities = 47/72 (65%), Positives = 51/72 (70%), Gaps = 3/72 (4%) Frame = +2 Query: 2 MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENNDIDEDAHVDMDLDV 181 +ERFLF VKALLH TSN TFWMGNLKHKDL GQVV SQ+Y D D+DA VD DL Sbjct: 1102 IERFLFHVKALLHATSNARTFWMGNLKHKDLMGQVVGSQVYGD-----DQDADVDGDLAE 1156 Query: 182 AE---QPLSNCS 208 AE QP+S S Sbjct: 1157 AEDNNQPISVAS 1168 >ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like [Vitis vinifera] Length = 1069 Score = 82.0 bits (201), Expect = 5e-14 Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%) Frame = +2 Query: 2 MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENND-IDED 154 MERFLFRVKALLH + + CTFWMGNLKHKDL GQVVSSQ Y D ND +DE+ Sbjct: 997 MERFLFRVKALLHTSPSECTFWMGNLKHKDLMGQVVSSQAYMDHQNDNLDEN 1048 >emb|CBI22055.3| unnamed protein product [Vitis vinifera] Length = 1507 Score = 82.0 bits (201), Expect = 5e-14 Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%) Frame = +2 Query: 2 MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENND-IDED 154 MERFLFRVKALLH + + CTFWMGNLKHKDL GQVVSSQ Y D ND +DE+ Sbjct: 1435 MERFLFRVKALLHTSPSECTFWMGNLKHKDLMGQVVSSQAYMDHQNDNLDEN 1486 >ref|XP_001776368.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672328|gb|EDQ58867.1| predicted protein [Physcomitrella patens subsp. patens] Length = 1660 Score = 74.7 bits (182), Expect = 7e-12 Identities = 34/51 (66%), Positives = 40/51 (78%) Frame = +2 Query: 2 MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENNDIDED 154 ME+F+F VKALLH SNG FWMGNLKHKDL G+ V+SQLY + N D DE+ Sbjct: 1584 MEKFIFCVKALLHGASNGSAFWMGNLKHKDLQGREVASQLYPEANGDEDEE 1634