BLASTX nr result

ID: Coptis21_contig00036387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036387
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002522593.1| conserved hypothetical protein [Ricinus comm...    84   9e-15
ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...    82   5e-14
emb|CBI22055.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_001776368.1| predicted protein [Physcomitrella patens sub...    75   7e-12

>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
            predicted protein [Populus trichocarpa]
          Length = 1476

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2    MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYA-DENNDIDEDAHVDMDLD 178
            MERFLFRVKALLH+TS+GCTFWMGNLKHKDL GQVVSSQ YA D+NN++DED    ++ D
Sbjct: 1404 MERFLFRVKALLHSTSSGCTFWMGNLKHKDLTGQVVSSQAYADDQNNNVDEDLAEAVEED 1463

Query: 179  VAEQPLSNCS 208
               QP+S  S
Sbjct: 1464 ---QPVSVAS 1470


>ref|XP_002522593.1| conserved hypothetical protein [Ricinus communis]
            gi|223538184|gb|EEF39794.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1188

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/72 (65%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
 Frame = +2

Query: 2    MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENNDIDEDAHVDMDLDV 181
            +ERFLF VKALLH TSN  TFWMGNLKHKDL GQVV SQ+Y D     D+DA VD DL  
Sbjct: 1102 IERFLFHVKALLHATSNARTFWMGNLKHKDLMGQVVGSQVYGD-----DQDADVDGDLAE 1156

Query: 182  AE---QPLSNCS 208
            AE   QP+S  S
Sbjct: 1157 AEDNNQPISVAS 1168


>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like
            [Vitis vinifera]
          Length = 1069

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = +2

Query: 2    MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENND-IDED 154
            MERFLFRVKALLH + + CTFWMGNLKHKDL GQVVSSQ Y D  ND +DE+
Sbjct: 997  MERFLFRVKALLHTSPSECTFWMGNLKHKDLMGQVVSSQAYMDHQNDNLDEN 1048


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/52 (75%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = +2

Query: 2    MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENND-IDED 154
            MERFLFRVKALLH + + CTFWMGNLKHKDL GQVVSSQ Y D  ND +DE+
Sbjct: 1435 MERFLFRVKALLHTSPSECTFWMGNLKHKDLMGQVVSSQAYMDHQNDNLDEN 1486


>ref|XP_001776368.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162672328|gb|EDQ58867.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1660

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/51 (66%), Positives = 40/51 (78%)
 Frame = +2

Query: 2    MERFLFRVKALLHNTSNGCTFWMGNLKHKDLFGQVVSSQLYADENNDIDED 154
            ME+F+F VKALLH  SNG  FWMGNLKHKDL G+ V+SQLY + N D DE+
Sbjct: 1584 MEKFIFCVKALLHGASNGSAFWMGNLKHKDLQGREVASQLYPEANGDEDEE 1634


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