BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036385
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
emb|CBI39579.3| unnamed protein product [Vitis vinifera]              108   4e-22
ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
ref|XP_002512497.1| pentatricopeptide repeat-containing protein,...   104   6e-21

>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/81 (65%), Positives = 66/81 (81%)
 Frame = -1

Query: 247 VFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGA 68
           +F+QMR+RS VSWN MI GL QSGRD  ALE+F++M D GFE DDAT+VT+LPVCARLGA
Sbjct: 195 LFRQMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGA 254

Query: 67  SELGSWIHSYADSRGLFQKFV 5
            ++G WIHSYA+S  L + F+
Sbjct: 255 VDVGEWIHSYAESSRLLRDFI 275



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = -1

Query: 247 VFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGA 68
           VF +M +++ VSWN MI GL  +G+  +  ++F++M+++G   +DAT V VL  CA  G 
Sbjct: 297 VFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGL 356

Query: 67  SELG 56
            E G
Sbjct: 357 VERG 360


>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = -1

Query: 241 QQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGASE 62
           + MR+RS VSWN MI GL QSGRD  ALE+F++M D GFE DDAT+VT+LPVCARLGA +
Sbjct: 171 RDMRDRSVVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVD 230

Query: 61  LGSWIHSYADSRGLFQKFV 5
           +G WIHSYA+S  L + F+
Sbjct: 231 VGEWIHSYAESSRLLRDFI 249



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 41/64 (64%)
 Frame = -1

Query: 247 VFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGA 68
           VF +M +++ VSWN MI GL  +G+  +  ++F++M+++G   +DAT V VL  CA  G 
Sbjct: 271 VFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGVLSCCAHAGL 330

Query: 67  SELG 56
            E G
Sbjct: 331 VERG 334


>ref|XP_002330193.1| predicted protein [Populus trichocarpa] gi|222871649|gb|EEF08780.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/81 (64%), Positives = 65/81 (80%)
 Frame = -1

Query: 247 VFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGA 68
           +F+QMR+RS VSWNIMI  LAQS RD  AL +F  MLD GF+ D+AT+VTVLP+CARLG+
Sbjct: 195 LFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGS 254

Query: 67  SELGSWIHSYADSRGLFQKFV 5
            ++G WIHSYA S GL++ FV
Sbjct: 255 VDVGKWIHSYAKSSGLYRDFV 275



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = -1

Query: 247 VFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGA 68
           VF +M  ++ +SWN +I GLA +G   + +E+ ++M++EG   +DAT V VL  CA  G 
Sbjct: 297 VFDEMPRKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGL 356

Query: 67  SELG 56
            E G
Sbjct: 357 FERG 360


>ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Glycine max]
          Length = 483

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/78 (61%), Positives = 65/78 (83%)
 Frame = -1

Query: 247 VFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGA 68
           VF QM+ER+ VSWN+M+  LA++ ++  ALE+F +ML++GFE DDA+LVTVLPVCARLGA
Sbjct: 194 VFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVLPVCARLGA 253

Query: 67  SELGSWIHSYADSRGLFQ 14
            ++G WIHSYA+S+G  Q
Sbjct: 254 VDIGEWIHSYANSKGFLQ 271



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = -1

Query: 247 VFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLGA 68
           +F  M  ++ VSWN MI GLA +G   V + +F++M+  GFE +D+T V VL  CA +G 
Sbjct: 296 IFNDMASKNVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGL 355

Query: 67  SELG 56
            + G
Sbjct: 356 VDRG 359


>ref|XP_002512497.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548458|gb|EEF49949.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 459

 Score =  104 bits (260), Expect = 6e-21
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = -1

Query: 250 HVFQQMRERSNVSWNIMIGGLAQSGRDVVALEVFKQMLDEGFELDDATLVTVLPVCARLG 71
           ++F++M ERS VSWNIMI  LAQSGRD  AL +F +M DEGF+ D+AT+VTVLP+CARL 
Sbjct: 352 YLFRKMSERSVVSWNIMISCLAQSGRDSEALRLFHEMQDEGFKPDEATVVTVLPICARLE 411

Query: 70  ASELGSWIHSYADSRGLFQKFV 5
           A  +G WI SYA+S GL+  FV
Sbjct: 412 AVSVGQWIQSYAESTGLYGDFV 433