BLASTX nr result

ID: Coptis21_contig00036352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036352
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268917.2| PREDICTED: uncharacterized protein LOC100256...    80   1e-13
emb|CBI25884.3| unnamed protein product [Vitis vinifera]               80   1e-13
emb|CAN66295.1| hypothetical protein VITISV_012600 [Vitis vinifera]    80   1e-13
ref|XP_002282310.2| PREDICTED: uncharacterized protein LOC100266...    70   2e-10
ref|XP_004141922.1| PREDICTED: uncharacterized protein LOC101217...    65   4e-09

>ref|XP_002268917.2| PREDICTED: uncharacterized protein LOC100256691, partial [Vitis
           vinifera]
          Length = 478

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 22/157 (14%)
 Frame = -1

Query: 407 GLYEEAVNISSSKRIRESPSDLYENKTDKSSSQ---CNVTGNPAALAASSTQLVPKLSR- 240
           GLY+EAV IS  + + E+ +D+ +  +  SS Q    +++ N   L  S+T+ +P L+R 
Sbjct: 99  GLYQEAVYISCKRHV-ENSTDVIDQSSVGSSKQEQSKSLSQNEINLETSATRPLPSLTRS 157

Query: 239 -------------DQIGNRSTRFRNEKQPLKRIHCS-----EDSRGKENESCTNSKRNNK 114
                        D+ G+ STR  N  Q LK+ + S     ED +GKEN +C NS +N K
Sbjct: 158 TSSRKLLSADSVSDRAGHCSTRTVNGTQALKKRNSSSPLLEEDRQGKENRTCMNSSKN-K 216

Query: 113 QSPKQPDQRIRTPVKGASLAQTSLEKRLEPVKIKLEC 3
           QSP +   R+ TPVK + +    +EK  +P+K++LEC
Sbjct: 217 QSPDKKSPRVITPVKKSPIKHEPVEKFRDPLKLQLEC 253


>emb|CBI25884.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 22/157 (14%)
 Frame = -1

Query: 407 GLYEEAVNISSSKRIRESPSDLYENKTDKSSSQ---CNVTGNPAALAASSTQLVPKLSR- 240
           GLY+EAV IS  + + E+ +D+ +  +  SS Q    +++ N   L  S+T+ +P L+R 
Sbjct: 99  GLYQEAVYISCKRHV-ENSTDVIDQSSVGSSKQEQSKSLSQNEINLETSATRPLPSLTRS 157

Query: 239 -------------DQIGNRSTRFRNEKQPLKRIHCS-----EDSRGKENESCTNSKRNNK 114
                        D+ G+ STR  N  Q LK+ + S     ED +GKEN +C NS +N K
Sbjct: 158 TSSRKLLSADSVSDRAGHCSTRTVNGTQALKKRNSSSPLLEEDRQGKENRTCMNSSKN-K 216

Query: 113 QSPKQPDQRIRTPVKGASLAQTSLEKRLEPVKIKLEC 3
           QSP +   R+ TPVK + +    +EK  +P+K++LEC
Sbjct: 217 QSPDKKSPRVITPVKKSPIKHEPVEKFRDPLKLQLEC 253


>emb|CAN66295.1| hypothetical protein VITISV_012600 [Vitis vinifera]
          Length = 682

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 22/157 (14%)
 Frame = -1

Query: 407 GLYEEAVNISSSKRIRESPSDLYENKTDKSSSQ---CNVTGNPAALAASSTQLVPKLSR- 240
           GLY+EAV IS  + + E+ +D+ +  +  SS Q    +++ N   L  S+T+ +P L+R 
Sbjct: 119 GLYQEAVYISCKRHV-ENSTDVIDQSSVGSSKQEQSKSLSQNEINLETSATRPLPSLTRS 177

Query: 239 -------------DQIGNRSTRFRNEKQPLKRIHCS-----EDSRGKENESCTNSKRNNK 114
                        D+ G+ STR  N  Q LK+ + S     ED +GKEN +C NS +N K
Sbjct: 178 TSSRKLLSADSVSDRAGHCSTRTVNGTQALKKRNSSSPLLEEDRQGKENRTCMNSSKN-K 236

Query: 113 QSPKQPDQRIRTPVKGASLAQTSLEKRLEPVKIKLEC 3
           QSP +   R+ TPVK + +    +EK  +P+K++LEC
Sbjct: 237 QSPDKKSPRVITPVKKSPIKHEPVEKFRDPLKLQLEC 273


>ref|XP_002282310.2| PREDICTED: uncharacterized protein LOC100266128 [Vitis vinifera]
           gi|302142367|emb|CBI19570.3| unnamed protein product
           [Vitis vinifera]
          Length = 573

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/134 (35%), Positives = 65/134 (48%)
 Frame = -1

Query: 407 GLYEEAVNISSSKRIRESPSDLYENKTDKSSSQCNVTGNPAALAASSTQLVPKLSRDQIG 228
           GLY+EAV ISSSK+  ES +DLY               NP  +  S       L +    
Sbjct: 121 GLYQEAVYISSSKKNMESLADLY---------------NPYLMRNSKKDQTKFLVQTVDN 165

Query: 227 NRSTRFRNEKQPLKRIHCSEDSRGKENESCTNSKRNNKQSPKQPDQRIRTPVKGASLAQT 48
           + ++  R+   P        D RGKEN+S  NS +NNK+ P    Q+I TPVK   +   
Sbjct: 166 SATSATRDAPSP------PADRRGKENQSYANSTKNNKRDPNNKAQKISTPVKRPPIEHG 219

Query: 47  SLEKRLEPVKIKLE 6
           S EK L+  K++LE
Sbjct: 220 SAEKHLDSQKLQLE 233


>ref|XP_004141922.1| PREDICTED: uncharacterized protein LOC101217980 [Cucumis sativus]
           gi|449512911|ref|XP_004164176.1| PREDICTED:
           uncharacterized LOC101217980 [Cucumis sativus]
          Length = 606

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
 Frame = -1

Query: 407 GLYEEAVNISSSKRIRESPSDLYEN------KTDKSSSQCNVTGNPAALAASSTQLVPKL 246
           GLY+EAV +SSS R  +  +D  E       K  ++ S C    N    A S  +L P L
Sbjct: 124 GLYQEAVYVSSSSRNSDISTDTMEPISTRIAKHRRTKSYCQ---NEFNSANSIARLQPSL 180

Query: 245 SR--------------DQIGNRSTRFRNEKQ-PLKR---IHCSEDSRGKENESCTNSKRN 120
           +R              D+ GN S RF N K  P K    +   ED  GKEN+S  N+ +N
Sbjct: 181 ARCSSSRKLLSNDTFFDRNGNGSNRFANGKHVPGKSSSFLFLPEDGLGKENQSYANTVKN 240

Query: 119 NKQSPKQPDQRIRTPVKGASLAQTSLEKRLEPVKIKLE 6
            K SP++   RI +P+K + L Q  LEK   P+K +LE
Sbjct: 241 -KPSPEKKVDRIISPLKKSPLKQEFLEKNSSPMKSQLE 277


Top