BLASTX nr result
ID: Coptis21_contig00036318
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036318 (669 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003552180.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l... 65 1e-08 ref|XP_003529103.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l... 65 1e-08 ref|XP_002866976.1| hypothetical protein ARALYDRAFT_490928 [Arab... 65 1e-08 emb|CBI23646.3| unnamed protein product [Vitis vinifera] 65 1e-08 ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-l... 65 1e-08 >ref|XP_003552180.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Glycine max] Length = 540 Score = 65.1 bits (157), Expect = 1e-08 Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 2/61 (3%) Frame = -3 Query: 286 VEKRAYTTGGCSGR--RNLWIREDSAKYLVILEISFAHCDPGTRSMREDPVSDSGQSEDL 113 VEKR TTGG S RNL IRED+AKYL+ L+++ AH DP TRSMREDP+ D+ +E Sbjct: 224 VEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKF 283 Query: 112 W 110 + Sbjct: 284 Y 284 >ref|XP_003529103.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Glycine max] Length = 540 Score = 65.1 bits (157), Expect = 1e-08 Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 2/61 (3%) Frame = -3 Query: 286 VEKRAYTTGGCSGR--RNLWIREDSAKYLVILEISFAHCDPGTRSMREDPVSDSGQSEDL 113 VEKR TTGG S RNL IRED+AKYL+ L+++ AH DP TRSMREDP+ D+ +E Sbjct: 224 VEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKF 283 Query: 112 W 110 + Sbjct: 284 Y 284 >ref|XP_002866976.1| hypothetical protein ARALYDRAFT_490928 [Arabidopsis lyrata subsp. lyrata] gi|297312812|gb|EFH43235.1| hypothetical protein ARALYDRAFT_490928 [Arabidopsis lyrata subsp. lyrata] Length = 536 Score = 65.1 bits (157), Expect = 1e-08 Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 2/61 (3%) Frame = -3 Query: 286 VEKRAYTTGGCSGR--RNLWIREDSAKYLVILEISFAHCDPGTRSMREDPVSDSGQSEDL 113 VEKR TTGG S RNL IRED+AKYL+ L+++ AH DP TRSMREDP+ D+ +E Sbjct: 220 VEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKF 279 Query: 112 W 110 + Sbjct: 280 Y 280 >emb|CBI23646.3| unnamed protein product [Vitis vinifera] Length = 477 Score = 65.1 bits (157), Expect = 1e-08 Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 2/61 (3%) Frame = -3 Query: 286 VEKRAYTTGGCSGR--RNLWIREDSAKYLVILEISFAHCDPGTRSMREDPVSDSGQSEDL 113 VEKR TTGG S RNL IRED+AKYL+ L+++ AH DP TRSMREDP+ D+ +E Sbjct: 161 VEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKF 220 Query: 112 W 110 + Sbjct: 221 Y 221 >ref|XP_002285201.1| PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Vitis vinifera] Length = 537 Score = 65.1 bits (157), Expect = 1e-08 Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 2/61 (3%) Frame = -3 Query: 286 VEKRAYTTGGCSGR--RNLWIREDSAKYLVILEISFAHCDPGTRSMREDPVSDSGQSEDL 113 VEKR TTGG S RNL IRED+AKYL+ L+++ AH DP TRSMREDP+ D+ +E Sbjct: 221 VEKRVRTTGGGSTGTVRNLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKF 280 Query: 112 W 110 + Sbjct: 281 Y 281