BLASTX nr result

ID: Coptis21_contig00036317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036317
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM35938.1| CCCH-type zinc finger protein C3H69 [Arabidopsis ...    68   7e-10
gb|ADM35937.1| CCCH-type zinc finger protein C3H69 [Arabidopsis ...    68   7e-10
sp|E0X9N4.1|C3H69_ARATH RecName: Full=Zinc finger CCCH domain-co...    68   7e-10
ref|XP_002876728.1| hypothetical protein ARALYDRAFT_907942 [Arab...    68   7e-10
ref|XP_003546878.1| PREDICTED: E3 ubiquitin-protein ligase makor...    68   9e-10

>gb|ADM35938.1| CCCH-type zinc finger protein C3H69 [Arabidopsis thaliana]
           gi|304557038|gb|ADM35943.1| CCCH-type zinc finger
           protein C3H69 [Arabidopsis thaliana]
          Length = 394

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 244 MSQRVLCKFFAHGACLKGDHYEFSHDWKDQSNN 342
           MS+R+LCKFFAHGACLKG+H EFSHDWKD +NN
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNN 33


>gb|ADM35937.1| CCCH-type zinc finger protein C3H69 [Arabidopsis thaliana]
           gi|304557037|gb|ADM35942.1| CCCH-type zinc finger
           protein C3H69 [Arabidopsis thaliana]
          Length = 357

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 244 MSQRVLCKFFAHGACLKGDHYEFSHDWKDQSNN 342
           MS+R+LCKFFAHGACLKG+H EFSHDWKD +NN
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNN 33


>sp|E0X9N4.1|C3H69_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 69;
           Short=AtC3H69 gi|304557030|gb|ADM35936.1| CCCH-type zinc
           finger protein C3H69 [Arabidopsis thaliana]
           gi|304557036|gb|ADM35941.1| CCCH-type zinc finger
           protein C3H69 [Arabidopsis thaliana]
          Length = 350

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 244 MSQRVLCKFFAHGACLKGDHYEFSHDWKDQSNN 342
           MS+R+LCKFFAHGACLKG+H EFSHDWKD +NN
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNN 33


>ref|XP_002876728.1| hypothetical protein ARALYDRAFT_907942 [Arabidopsis lyrata subsp.
           lyrata] gi|297322566|gb|EFH52987.1| hypothetical protein
           ARALYDRAFT_907942 [Arabidopsis lyrata subsp. lyrata]
          Length = 353

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +1

Query: 244 MSQRVLCKFFAHGACLKGDHYEFSHDWKDQSNN 342
           MS+R+LCKFFAHGACLKG+H EFSHDWKD +NN
Sbjct: 1   MSKRILCKFFAHGACLKGEHCEFSHDWKDPTNN 33


>ref|XP_003546878.1| PREDICTED: E3 ubiquitin-protein ligase makorin-like [Glycine max]
          Length = 363

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +1

Query: 244 MSQRVLCKFFAHGACLKGDHYEFSHDWKDQSNN 342
           MS+RVLCKFFAHGACLKG+H EFSHDWKD  NN
Sbjct: 1   MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN 33


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