BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036304
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
emb|CBI28142.3| unnamed protein product [Vitis vinifera]              147   9e-34
ref|XP_002529360.1| pentatricopeptide repeat-containing protein,...   132   3e-29
ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containi...   125   3e-27
ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27

>ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  147 bits (371), Expect = 9e-34
 Identities = 65/92 (70%), Positives = 80/92 (86%)
 Frame = +2

Query: 5   ACRIHRNVHMGERVARRILGMESSDSGIHSLAANLYAAADRWEDVTKVRRKMKDQGIKKT 184
           ACR H NV MGERVA+R++G+ES DS +H+L AN+YA+ADRWEDVTKVRRKMKD G+KK 
Sbjct: 546 ACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKV 605

Query: 185 PGCSSIEVNGVFHEFLVADSSHPKARESYALL 280
           PGCSS+EVNG+ HEFLV D+SHP+ RE Y++L
Sbjct: 606 PGCSSVEVNGIVHEFLVGDASHPEMREIYSML 637


>emb|CBI28142.3| unnamed protein product [Vitis vinifera]
          Length = 571

 Score =  147 bits (371), Expect = 9e-34
 Identities = 65/92 (70%), Positives = 80/92 (86%)
 Frame = +2

Query: 5   ACRIHRNVHMGERVARRILGMESSDSGIHSLAANLYAAADRWEDVTKVRRKMKDQGIKKT 184
           ACR H NV MGERVA+R++G+ES DS +H+L AN+YA+ADRWEDVTKVRRKMKD G+KK 
Sbjct: 455 ACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKV 514

Query: 185 PGCSSIEVNGVFHEFLVADSSHPKARESYALL 280
           PGCSS+EVNG+ HEFLV D+SHP+ RE Y++L
Sbjct: 515 PGCSSVEVNGIVHEFLVGDASHPEMREIYSML 546


>ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531180|gb|EEF33027.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 683

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/92 (66%), Positives = 74/92 (80%)
 Frame = +2

Query: 5   ACRIHRNVHMGERVARRILGMESSDSGIHSLAANLYAAADRWEDVTKVRRKMKDQGIKKT 184
           ACRI+ NV MGERVA++++  ESSDS +H+L AN+YA ADRWEDVTKVRRKMKD G+KKT
Sbjct: 551 ACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKT 610

Query: 185 PGCSSIEVNGVFHEFLVADSSHPKARESYALL 280
           PGCSSIEV+ + HEF     SHP+ RE Y +L
Sbjct: 611 PGCSSIEVDSIIHEFFSGHPSHPEMREIYYML 642


>ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/92 (61%), Positives = 72/92 (78%)
 Frame = +2

Query: 5   ACRIHRNVHMGERVARRILGMESSDSGIHSLAANLYAAADRWEDVTKVRRKMKDQGIKKT 184
           ACRIH NV MGER+A+++  +ES DS IH+L AN+YA+ DRWED  KVRRKMK+ G+KK 
Sbjct: 657 ACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKM 716

Query: 185 PGCSSIEVNGVFHEFLVADSSHPKARESYALL 280
           PGCS IEV+G+ HEFLV D SHP+  E  ++L
Sbjct: 717 PGCSLIEVDGIVHEFLVGDPSHPEMMEICSML 748


>ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/92 (61%), Positives = 72/92 (78%)
 Frame = +2

Query: 5   ACRIHRNVHMGERVARRILGMESSDSGIHSLAANLYAAADRWEDVTKVRRKMKDQGIKKT 184
           ACRIH NV MGER+A+++  +ES DS IH+L AN+YA+ DRWED  KVRRKMK+ G+KK 
Sbjct: 611 ACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKM 670

Query: 185 PGCSSIEVNGVFHEFLVADSSHPKARESYALL 280
           PGCS IEV+G+ HEFLV D SHP+  E  ++L
Sbjct: 671 PGCSLIEVDGIVHEFLVGDPSHPEMIEICSML 702