BLASTX nr result

ID: Coptis21_contig00036285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036285
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618588.1| LCR [Medicago truncatula] gi|355493603|gb|AE...    58   2e-08
gb|ABD32510.1| hypothetical protein MtrDRAFT_AC147482g27v2 [Medi...    58   2e-08
ref|XP_003623809.1| Xylem serine proteinase [Medicago truncatula...    58   4e-08
ref|XP_003638080.1| hypothetical protein MTR_118s0003 [Medicago ...    55   6e-08
ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago ...    62   6e-08

>ref|XP_003618588.1| LCR [Medicago truncatula] gi|355493603|gb|AES74806.1| LCR [Medicago
           truncatula]
          Length = 245

 Score = 57.8 bits (138), Expect(2) = 2e-08
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
 Frame = -2

Query: 165 EGACMANQDCFLSF--DTFGFLATEAVELLRRLSKVLDNNVITAGSNEYMFRRIGFA 1
           E AC  N+  F+SF  DTFGFLA E V+LL R+ KV+ +NV++  S   +F RIGFA
Sbjct: 170 EKACSDNEHAFISFAFDTFGFLAPEVVDLLHRVQKVMHDNVMSPRSMNIVFTRIGFA 226



 Score = 25.8 bits (55), Expect(2) = 2e-08
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 250 KHACIYITRVSPTVG 206
           KHAC+ +T VSP VG
Sbjct: 132 KHACVDLTGVSPLVG 146


>gb|ABD32510.1| hypothetical protein MtrDRAFT_AC147482g27v2 [Medicago truncatula]
          Length = 217

 Score = 57.8 bits (138), Expect(2) = 2e-08
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
 Frame = -2

Query: 165 EGACMANQDCFLSF--DTFGFLATEAVELLRRLSKVLDNNVITAGSNEYMFRRIGFA 1
           E AC  N+  F+SF  DTFGFLA E V+LL R+ KV+ +NV++  S   +F RIGFA
Sbjct: 142 EKACSDNEHAFISFAFDTFGFLAPEVVDLLHRVQKVMHDNVMSPRSMNIVFTRIGFA 198



 Score = 25.8 bits (55), Expect(2) = 2e-08
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 250 KHACIYITRVSPTVG 206
           KHAC+ +T VSP VG
Sbjct: 104 KHACVDLTGVSPLVG 118


>ref|XP_003623809.1| Xylem serine proteinase [Medicago truncatula]
           gi|355498824|gb|AES80027.1| Xylem serine proteinase
           [Medicago truncatula]
          Length = 900

 Score = 57.8 bits (138), Expect(2) = 4e-08
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = -2

Query: 195 RSSSK*CTYREGACMANQDCFL--SFDTFGFLATEAVELLRRLSKVLDNNVITAGSNEYM 22
           +++S      E AC+ NQ  F+  +FDTF FLA+E V+LL R+ +V+ NNV++  S   +
Sbjct: 96  KAASSKVAKHEKACLDNQHVFIPFAFDTFDFLASETVDLLHRVQRVMHNNVMSPKSMNVV 155

Query: 21  FRRIGFA 1
           F RIGFA
Sbjct: 156 FTRIGFA 162



 Score = 24.3 bits (51), Expect(2) = 4e-08
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 250 KHACIYITRVSPTVG 206
           KH C+ +T VSP VG
Sbjct: 68  KHVCVDLTGVSPLVG 82


>ref|XP_003638080.1| hypothetical protein MTR_118s0003 [Medicago truncatula]
           gi|355504015|gb|AES85218.1| hypothetical protein
           MTR_118s0003 [Medicago truncatula]
          Length = 178

 Score = 55.5 bits (132), Expect(2) = 6e-08
 Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = -2

Query: 165 EGACMANQDCFL--SFDTFGFLATEAVELLRRLSKVLDNNVITAGSNEYMFRRIGFA 1
           E AC  NQ  F+  +FD FGFL  E V+LL R+ +V+ NNV+T  S   MF RI FA
Sbjct: 82  EKACFDNQHAFIQFAFDIFGFLTPEVVDLLHRVQRVMHNNVMTPRSMNVMFTRIDFA 138



 Score = 26.2 bits (56), Expect(2) = 6e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 253 EKHACIYITRVSPTVG 206
           EKH C+ +T VSP VG
Sbjct: 43  EKHTCVDLTGVSPLVG 58


>ref|XP_003597432.1| hypothetical protein MTR_2g097990 [Medicago truncatula]
           gi|355486480|gb|AES67683.1| hypothetical protein
           MTR_2g097990 [Medicago truncatula]
          Length = 289

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = -2

Query: 195 RSSSK*CTYREGACMANQDCFL--SFDTFGFLATEAVELLRRLSKVLDNNVITAGSNEYM 22
           +++S      E AC  NQ  F+  +FDTFGFLA EAV+LL R+ KV+ NNV++  S   +
Sbjct: 219 KAASSKVVKHEKACSDNQHAFIPFAFDTFGFLAPEAVDLLHRVQKVMHNNVMSPRSMNVV 278

Query: 21  FRRIGFA 1
           F RIGFA
Sbjct: 279 FTRIGFA 285


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