BLASTX nr result

ID: Coptis21_contig00036280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036280
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268377.1| PREDICTED: guanosine-3',5'-bis(diphosphate) ...   219   2e-55
ref|XP_003542406.1| PREDICTED: guanosine-3',5'-bis(diphosphate) ...   213   2e-53
ref|XP_002314331.1| predicted protein [Populus trichocarpa] gi|2...   211   5e-53
dbj|BAC76005.1| RelA-SpoT like protein RSH4 [Nicotiana tabacum]       211   6e-53
ref|XP_003609875.1| GTP pyrophosphokinase [Medicago truncatula] ...   209   2e-52

>ref|XP_002268377.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
           [Vitis vinifera] gi|297736813|emb|CBI26014.3| unnamed
           protein product [Vitis vinifera]
          Length = 580

 Score =  219 bits (558), Expect = 2e-55
 Identities = 108/143 (75%), Positives = 129/143 (90%)
 Frame = +3

Query: 6   LSVALVLADLQMDAEVISAGMLREVLESGAMSLQEIKSQMGPGTAHLLHERLRVTKIPSK 185
           LSVAL+LADLQMDAEVISAG+LREVLE+GA+++ E++ ++G GTAHLLHE LRV +IPSK
Sbjct: 119 LSVALILADLQMDAEVISAGILREVLEAGAVTIYEVRDRIGTGTAHLLHESLRVKQIPSK 178

Query: 186 VEILDDDSASALRKFCLSYYDIRAVTLELALKLDTMRHLDYLPRYQQQMLSFEVMKIFAP 365
           VE+LDDDS +ALRKFCL+YYD+RAV L+LA++LD M+HLDYLPRYQQQMLS EVMKI  P
Sbjct: 179 VEVLDDDSTAALRKFCLTYYDVRAVILDLAIRLDMMKHLDYLPRYQQQMLSLEVMKIHVP 238

Query: 366 LAHAVGTSAVSQELEDLSFRYLF 434
           LAHAVGT+ +S ELEDLSFR LF
Sbjct: 239 LAHAVGTNFLSLELEDLSFRCLF 261


>ref|XP_003542406.1| PREDICTED: guanosine-3',5'-bis(diphosphate)
           3'-pyrophosphohydrolase-like [Glycine max]
          Length = 579

 Score =  213 bits (541), Expect = 2e-53
 Identities = 104/143 (72%), Positives = 127/143 (88%)
 Frame = +3

Query: 6   LSVALVLADLQMDAEVISAGMLREVLESGAMSLQEIKSQMGPGTAHLLHERLRVTKIPSK 185
           LSVAL+LADLQMDAEVISAG+ R VLE+G +S+ EI++QMG  TAHLLHE LRV   PS+
Sbjct: 118 LSVALLLADLQMDAEVISAGIFRAVLEAGELSIHEIRNQMGLATAHLLHESLRVNNFPSR 177

Query: 186 VEILDDDSASALRKFCLSYYDIRAVTLELALKLDTMRHLDYLPRYQQQMLSFEVMKIFAP 365
           ++++DDD+A+ALRKFCL+YYDIRA+ L+LALKLD MRHLDYLPRYQQQ++S +VMKI AP
Sbjct: 178 IDVVDDDNAAALRKFCLTYYDIRALILDLALKLDMMRHLDYLPRYQQQIISMQVMKIHAP 237

Query: 366 LAHAVGTSAVSQELEDLSFRYLF 434
           LAHAVGT+ +S ELEDLSF+YLF
Sbjct: 238 LAHAVGTTYLSLELEDLSFQYLF 260


>ref|XP_002314331.1| predicted protein [Populus trichocarpa] gi|222863371|gb|EEF00502.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  211 bits (537), Expect = 5e-53
 Identities = 104/143 (72%), Positives = 126/143 (88%)
 Frame = +3

Query: 6   LSVALVLADLQMDAEVISAGMLREVLESGAMSLQEIKSQMGPGTAHLLHERLRVTKIPSK 185
           LS+AL+LADLQMDAEVISAG+L +V E+ A++++E++ ++G GTAHLLHE  R+   PS+
Sbjct: 74  LSLALLLADLQMDAEVISAGILMQVFETSAITIREVRDKIGSGTAHLLHESWRMKNSPSR 133

Query: 186 VEILDDDSASALRKFCLSYYDIRAVTLELALKLDTMRHLDYLPRYQQQMLSFEVMKIFAP 365
           +E+LDDDSA ALRKFCL+YYDIRAV LELA KLD MRHLDYLPRYQQQMLS +VMKI+AP
Sbjct: 134 IEVLDDDSAYALRKFCLTYYDIRAVILELATKLDMMRHLDYLPRYQQQMLSLQVMKIYAP 193

Query: 366 LAHAVGTSAVSQELEDLSFRYLF 434
           LAHAVGT+ +S ELEDLSFRYLF
Sbjct: 194 LAHAVGTNWLSLELEDLSFRYLF 216


>dbj|BAC76005.1| RelA-SpoT like protein RSH4 [Nicotiana tabacum]
          Length = 552

 Score =  211 bits (536), Expect = 6e-53
 Identities = 101/143 (70%), Positives = 127/143 (88%)
 Frame = +3

Query: 6   LSVALVLADLQMDAEVISAGMLREVLESGAMSLQEIKSQMGPGTAHLLHERLRVTKIPSK 185
           LSVA++LADL+MDAEVIS G+LREVLE+GA+S+ +++ ++G  TAHLLHE LRV  +  K
Sbjct: 93  LSVAVILADLRMDAEVISTGLLREVLEAGAISIYDVRDRIGTSTAHLLHESLRVKHMSLK 152

Query: 186 VEILDDDSASALRKFCLSYYDIRAVTLELALKLDTMRHLDYLPRYQQQMLSFEVMKIFAP 365
           VE+LDDDSA+ALRKFCL+YYD+RA+ L+LA+KLD MRHLDYLPRY+QQM+S EVMK+ AP
Sbjct: 153 VEVLDDDSATALRKFCLTYYDVRALVLDLAIKLDMMRHLDYLPRYRQQMISLEVMKLHAP 212

Query: 366 LAHAVGTSAVSQELEDLSFRYLF 434
           LAHA+GT+ +S ELEDLSFRYLF
Sbjct: 213 LAHAIGTNLLSLELEDLSFRYLF 235


>ref|XP_003609875.1| GTP pyrophosphokinase [Medicago truncatula]
           gi|355510930|gb|AES92072.1| GTP pyrophosphokinase
           [Medicago truncatula]
          Length = 580

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/143 (72%), Positives = 127/143 (88%)
 Frame = +3

Query: 6   LSVALVLADLQMDAEVISAGMLREVLESGAMSLQEIKSQMGPGTAHLLHERLRVTKIPSK 185
           LS+A++LADLQMDAEVISAG+LREVLE G ++L EI+SQ+G  TAHLLHE LRV    S+
Sbjct: 120 LSIAMLLADLQMDAEVISAGILREVLEVGELNLHEIRSQIGSATAHLLHESLRVKNFASR 179

Query: 186 VEILDDDSASALRKFCLSYYDIRAVTLELALKLDTMRHLDYLPRYQQQMLSFEVMKIFAP 365
           V+ILDD++A+ALRKFCL+YYDIRA+ L+LALKLD MRHL +LPRYQQQ++S +VMKI+AP
Sbjct: 180 VDILDDENAAALRKFCLTYYDIRALILDLALKLDMMRHLGHLPRYQQQIISLQVMKIYAP 239

Query: 366 LAHAVGTSAVSQELEDLSFRYLF 434
           LAHAVGT+ +S ELEDLSF+YLF
Sbjct: 240 LAHAVGTNYISLELEDLSFQYLF 262


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