BLASTX nr result

ID: Coptis21_contig00036237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036237
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510484.1| protein with unknown function [Ricinus commu...   116   2e-24
ref|XP_002306906.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002310296.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
emb|CBI19800.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002280668.1| PREDICTED: probable LRR receptor-like serine...   110   9e-23

>ref|XP_002510484.1| protein with unknown function [Ricinus communis]
            gi|223551185|gb|EEF52671.1| protein with unknown function
            [Ricinus communis]
          Length = 1135

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/120 (52%), Positives = 76/120 (63%)
 Frame = -2

Query: 361  LNKNCENVNKANRRRKMKKLLLMIGVAIAGAXXXXXXXXXXXXXXLRWRKQLQAAASGEK 182
            L + C NV    R RK K+L L+IGV +AG               LRWRK+L+   +GEK
Sbjct: 741  LGRECTNV----RNRKRKRLFLLIGVTVAGGFLLLLCCCGYIYSLLRWRKRLREGLNGEK 796

Query: 181  KRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQFDEENVLSRGRYGLLFK 2
            K SPART              GPK++MFNNK+T+AET+EATRQFDEENVLSRGRYGL+FK
Sbjct: 797  KPSPARTSSGAERSRRSGENGGPKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFK 856


>ref|XP_002306906.1| predicted protein [Populus trichocarpa] gi|222856355|gb|EEE93902.1|
            predicted protein [Populus trichocarpa]
          Length = 1127

 Score =  113 bits (282), Expect = 2e-23
 Identities = 62/120 (51%), Positives = 75/120 (62%)
 Frame = -2

Query: 361  LNKNCENVNKANRRRKMKKLLLMIGVAIAGAXXXXXXXXXXXXXXLRWRKQLQAAASGEK 182
            L++ C NV    R RK KKL+L IGV IA                LRWRK+L+   +GEK
Sbjct: 734  LDRECANV----RNRKRKKLILFIGVPIAATVLLALCCCAYIYSLLRWRKRLRDGVTGEK 789

Query: 181  KRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQFDEENVLSRGRYGLLFK 2
            KRSPA                GPK++MFNNK+T+AET+EATRQFDE+NVLSRGRYGL+FK
Sbjct: 790  KRSPASASSGADRSRGSGENGGPKLVMFNNKITYAETLEATRQFDEDNVLSRGRYGLVFK 849


>ref|XP_002310296.1| predicted protein [Populus trichocarpa] gi|222853199|gb|EEE90746.1|
            predicted protein [Populus trichocarpa]
          Length = 1126

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/120 (51%), Positives = 77/120 (64%)
 Frame = -2

Query: 361  LNKNCENVNKANRRRKMKKLLLMIGVAIAGAXXXXXXXXXXXXXXLRWRKQLQAAASGEK 182
            L +NC +V  +NRR   K+L+L+I V ++GA              LRWRK+L+  A+GEK
Sbjct: 733  LPRNCVDVEASNRR---KRLILLIVVVVSGACMLALCCCFYTYSLLRWRKRLKQGAAGEK 789

Query: 181  KRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQFDEENVLSRGRYGLLFK 2
            KRSPAR               GPK++MFNNK+T AET EATRQFDEENVLSR RYGL+FK
Sbjct: 790  KRSPARPSSNGSGGRGSTDNGGPKLVMFNNKITLAETTEATRQFDEENVLSRTRYGLVFK 849


>emb|CBI19800.3| unnamed protein product [Vitis vinifera]
          Length = 898

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/120 (50%), Positives = 77/120 (64%)
 Frame = -2

Query: 361 LNKNCENVNKANRRRKMKKLLLMIGVAIAGAXXXXXXXXXXXXXXLRWRKQLQAAASGEK 182
           L + CE V K    RK +KL+L++ VA+ GA              LRWRK+L+  A+GEK
Sbjct: 502 LKEECEGVTK----RKRRKLILLVCVAVGGATLLALCCCGYIFSLLRWRKKLREGAAGEK 557

Query: 181 KRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQFDEENVLSRGRYGLLFK 2
           KRSPA +               PK++MFNNK+T+AET+EATRQFDEENVLSRGRYGL+FK
Sbjct: 558 KRSPAPSSGGERGRGSGENGG-PKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFK 616


>ref|XP_002280668.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g36180 [Vitis vinifera]
          Length = 1127

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/120 (50%), Positives = 77/120 (64%)
 Frame = -2

Query: 361  LNKNCENVNKANRRRKMKKLLLMIGVAIAGAXXXXXXXXXXXXXXLRWRKQLQAAASGEK 182
            L + CE V K    RK +KL+L++ VA+ GA              LRWRK+L+  A+GEK
Sbjct: 739  LKEECEGVTK----RKRRKLILLVCVAVGGATLLALCCCGYIFSLLRWRKKLREGAAGEK 794

Query: 181  KRSPARTXXXXXXXXXXXXXXGPKMIMFNNKLTFAETVEATRQFDEENVLSRGRYGLLFK 2
            KRSPA +               PK++MFNNK+T+AET+EATRQFDEENVLSRGRYGL+FK
Sbjct: 795  KRSPAPSSGGERGRGSGENGG-PKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFK 853


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