BLASTX nr result

ID: Coptis21_contig00036220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036220
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   206   2e-51
emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]   198   3e-49
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   196   2e-48
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 196   2e-48
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   195   3e-48

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  206 bits (524), Expect = 2e-51
 Identities = 95/150 (63%), Positives = 117/150 (78%)
 Frame = +2

Query: 2    LGFVVSTDGIRVDESKVQAIIEWPIPSTVTQVRSFHGLASFYRRFIHNFSSIMAPLTALT 181
            LGFVVS+ G+  D  K++AI++WP+P+ + +VRSFHG+A+FYRRFI NFSSIMAP+T   
Sbjct: 822  LGFVVSSKGVETDPEKIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECM 881

Query: 182  SEKAFKWTPEANEAFDLIKKKMTSAPVLVLPDFTQLFEVTCDACKYGIGAVLSQNGKPVA 361
                F WT  AN+AF+ IK KM + P+L LPDF ++FEV CDA   GIGAVLSQ G PVA
Sbjct: 882  KPGLFIWTKAANKAFEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVA 941

Query: 362  FYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 451
            F+SEKL GAK  YSTYDLE+YAVVQA+RHW
Sbjct: 942  FFSEKLNGAKKKYSTYDLEFYAVVQAIRHW 971


>emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]
          Length = 372

 Score =  198 bits (504), Expect = 3e-49
 Identities = 91/150 (60%), Positives = 115/150 (76%)
 Frame = +2

Query: 2   LGFVVSTDGIRVDESKVQAIIEWPIPSTVTQVRSFHGLASFYRRFIHNFSSIMAPLTALT 181
           LGFVVS+ G+  D  K++AI++WP+P+ + +VRSFHG+ +FYRRFI NF+SIMAP+T   
Sbjct: 148 LGFVVSSKGVETDPKKIKAIVDWPVPTNIHEVRSFHGITTFYRRFIQNFNSIMAPITKCM 207

Query: 182 SEKAFKWTPEANEAFDLIKKKMTSAPVLVLPDFTQLFEVTCDACKYGIGAVLSQNGKPVA 361
               F WT  AN+AF+ IK KM + P+L LPDF ++FEV CDA   GIGAVLSQ G  VA
Sbjct: 208 KPGLFIWTKAANKAFEEIKSKMVNPPILHLPDFEKVFEVACDASHVGIGAVLSQEGHLVA 267

Query: 362 FYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 451
           F+SEKL GAK  YSTYDLE+YA+VQA+RHW
Sbjct: 268 FFSEKLNGAKKKYSTYDLEFYAMVQAIRHW 297


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/150 (61%), Positives = 116/150 (77%)
 Frame = +2

Query: 2   LGFVVSTDGIRVDESKVQAIIEWPIPSTVTQVRSFHGLASFYRRFIHNFSSIMAPLTALT 181
           LGFVVS+ G+  D  KVQAI+EWP P ++  VRSFHGLA+FYRRFI  FS IMAP+T   
Sbjct: 148 LGFVVSSQGVSADPQKVQAIVEWPEPRSIRDVRSFHGLATFYRRFIKEFSVIMAPITDCL 207

Query: 182 SEKAFKWTPEANEAFDLIKKKMTSAPVLVLPDFTQLFEVTCDACKYGIGAVLSQNGKPVA 361
            ++ F+W+ EA  AF  IK++MT APV+ LPDF+++FEV CDA   GIG VLSQ   P+A
Sbjct: 208 KKEEFRWSEEAATAFKEIKQRMTDAPVMRLPDFSKVFEVACDASGIGIGGVLSQEKHPIA 267

Query: 362 FYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 451
           ++S KL+GAKLNYSTYD E+YAVVQ++RHW
Sbjct: 268 YFSAKLSGAKLNYSTYDKEFYAVVQSLRHW 297


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  196 bits (497), Expect = 2e-48
 Identities = 89/150 (59%), Positives = 117/150 (78%)
 Frame = +2

Query: 2    LGFVVSTDGIRVDESKVQAIIEWPIPSTVTQVRSFHGLASFYRRFIHNFSSIMAPLTALT 181
            LGF++S  GI VD+ KV+AI  WPIP  +T VRSFHGLASFYRRFI +FS++MAP+T   
Sbjct: 803  LGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPITECM 862

Query: 182  SEKAFKWTPEANEAFDLIKKKMTSAPVLVLPDFTQLFEVTCDACKYGIGAVLSQNGKPVA 361
             +  FKW  +A  +F++IK+K+  +P+L LP+F +LFEV CDA   GIGAVL Q  KP+A
Sbjct: 863  KKGEFKWGDKAESSFNIIKEKLCESPILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIA 922

Query: 362  FYSEKLTGAKLNYSTYDLEYYAVVQAVRHW 451
            ++SEKL+GAKLNYSTYD E+YA+V+A+ HW
Sbjct: 923  YFSEKLSGAKLNYSTYDKEFYAIVRALNHW 952


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  195 bits (496), Expect = 3e-48
 Identities = 89/142 (62%), Positives = 110/142 (77%)
 Frame = +2

Query: 26   GIRVDESKVQAIIEWPIPSTVTQVRSFHGLASFYRRFIHNFSSIMAPLTALTSEKAFKWT 205
            G+  D  K++AI++WP+P+ + +VRSFHG+A+FYRRFI NFSSIMAP+T       F WT
Sbjct: 755  GVETDPEKIKAIVDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWT 814

Query: 206  PEANEAFDLIKKKMTSAPVLVLPDFTQLFEVTCDACKYGIGAVLSQNGKPVAFYSEKLTG 385
              AN+AF+ IK KM + P+L LPDF ++FEV CDA   GIGAVLSQ G PVAF+SEKL G
Sbjct: 815  KAANKAFEEIKSKMVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNG 874

Query: 386  AKLNYSTYDLEYYAVVQAVRHW 451
            AK  YSTYDLE+YAVVQA+RHW
Sbjct: 875  AKKKYSTYDLEFYAVVQAIRHW 896


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