BLASTX nr result

ID: Coptis21_contig00036202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036202
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279988.1| PREDICTED: uncharacterized protein LOC100268...   123   2e-26
emb|CAN62485.1| hypothetical protein VITISV_010813 [Vitis vinifera]   123   2e-26
emb|CBI15660.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002318723.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002322248.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23

>ref|XP_002279988.1| PREDICTED: uncharacterized protein LOC100268151 [Vitis vinifera]
          Length = 657

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/100 (63%), Positives = 70/100 (70%)
 Frame = +2

Query: 8   LHLDNISPMGRRXXXXXXXXXXXXXXXXXXXXDRAMRYIFLMNNILYIVQKVKNSELGKL 187
           L L N  P+GRR                    D AM+YIFLMNNILYIVQKVK+SELGK+
Sbjct: 454 LQLGNTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIVQKVKDSELGKI 513

Query: 188 LGDQWVRKRRSQIRQYSTCYLRASWTKVLSYLKDEGIAGS 307
           LGD WVRKRR QIRQY+T YLRASW+KVL+ LKDEGI GS
Sbjct: 514 LGDHWVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGS 553


>emb|CAN62485.1| hypothetical protein VITISV_010813 [Vitis vinifera]
          Length = 657

 Score =  123 bits (308), Expect = 2e-26
 Identities = 63/100 (63%), Positives = 70/100 (70%)
 Frame = +2

Query: 8   LHLDNISPMGRRXXXXXXXXXXXXXXXXXXXXDRAMRYIFLMNNILYIVQKVKNSELGKL 187
           L L N  P+GRR                    D AM+YIFLMNNILYIVQKVK+SELGK+
Sbjct: 454 LQLGNTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIVQKVKDSELGKI 513

Query: 188 LGDQWVRKRRSQIRQYSTCYLRASWTKVLSYLKDEGIAGS 307
           LGD WVRKRR QIRQY+T YLRASW+KVL+ LKDEGI GS
Sbjct: 514 LGDHWVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGS 553


>emb|CBI15660.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/96 (63%), Positives = 68/96 (70%)
 Frame = +2

Query: 20  NISPMGRRXXXXXXXXXXXXXXXXXXXXDRAMRYIFLMNNILYIVQKVKNSELGKLLGDQ 199
           N  P+GRR                    D AM+YIFLMNNILYIVQKVK+SELGK+LGD 
Sbjct: 262 NTPPIGRRLLLLMSCLESNLTEKSKLYEDNAMQYIFLMNNILYIVQKVKDSELGKILGDH 321

Query: 200 WVRKRRSQIRQYSTCYLRASWTKVLSYLKDEGIAGS 307
           WVRKRR QIRQY+T YLRASW+KVL+ LKDEGI GS
Sbjct: 322 WVRKRRGQIRQYATSYLRASWSKVLACLKDEGIGGS 357


>ref|XP_002318723.1| predicted protein [Populus trichocarpa] gi|222859396|gb|EEE96943.1|
           predicted protein [Populus trichocarpa]
          Length = 660

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/100 (59%), Positives = 69/100 (69%)
 Frame = +2

Query: 8   LHLDNISPMGRRXXXXXXXXXXXXXXXXXXXXDRAMRYIFLMNNILYIVQKVKNSELGKL 187
           L L+++SP+ RR                    D AM+YIF MNNILY+VQKVK+SEL K+
Sbjct: 457 LQLESLSPIARRLLALLSTLESNLEEKSTLYEDGAMQYIFRMNNILYMVQKVKDSELIKI 516

Query: 188 LGDQWVRKRRSQIRQYSTCYLRASWTKVLSYLKDEGIAGS 307
           LGDQWVRK R QIRQY+T YLRA+WTK LS LKDEGI GS
Sbjct: 517 LGDQWVRKHRGQIRQYATAYLRAAWTKALSCLKDEGIGGS 556


>ref|XP_002322248.1| predicted protein [Populus trichocarpa] gi|222869244|gb|EEF06375.1|
           predicted protein [Populus trichocarpa]
          Length = 656

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/100 (58%), Positives = 70/100 (70%)
 Frame = +2

Query: 8   LHLDNISPMGRRXXXXXXXXXXXXXXXXXXXXDRAMRYIFLMNNILYIVQKVKNSELGKL 187
           L L++++P+ RR                    D AM+YIFLMNNILY+VQKVK+SEL K+
Sbjct: 453 LQLESMAPITRRLLALLSTLESNLEEKSRLYEDGAMQYIFLMNNILYMVQKVKDSELIKI 512

Query: 188 LGDQWVRKRRSQIRQYSTCYLRASWTKVLSYLKDEGIAGS 307
           LGDQWVRK R QIRQY+T YLRA+W+K LS LKDEGI GS
Sbjct: 513 LGDQWVRKHRGQIRQYATAYLRAAWSKALSCLKDEGIGGS 552


Top