BLASTX nr result

ID: Coptis21_contig00036201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036201
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23362.3| unnamed protein product [Vitis vinifera]              129   2e-28
ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   129   2e-28
ref|XP_002527924.1| multidrug resistance pump, putative [Ricinus...   125   5e-27
ref|XP_002329229.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>emb|CBI23362.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/67 (97%), Positives = 66/67 (98%)
 Frame = +3

Query: 3   GPAIFTSICQYSLGAITQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ 182
           GPAIFTS+CQYSLGAITQVFAG VGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ
Sbjct: 705 GPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ 764

Query: 183 AFGAGQL 203
           AFGAGQL
Sbjct: 765 AFGAGQL 771



 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/67 (79%), Positives = 59/67 (88%)
 Frame = +3

Query: 3   GPAIFTSICQYSLGAITQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ 182
           GPAIFT +C+YSLGAITQVF G +G L+LAA +VENSVI+ FS G MLGMGSALETLCGQ
Sbjct: 94  GPAIFTYLCRYSLGAITQVFVGHIGALQLAAFAVENSVISMFSLGTMLGMGSALETLCGQ 153

Query: 183 AFGAGQL 203
           AFGAGQL
Sbjct: 154 AFGAGQL 160


>ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
          Length = 544

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/67 (97%), Positives = 66/67 (98%)
 Frame = +3

Query: 3   GPAIFTSICQYSLGAITQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ 182
           GPAIFTS+CQYSLGAITQVFAG VGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ
Sbjct: 97  GPAIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ 156

Query: 183 AFGAGQL 203
           AFGAGQL
Sbjct: 157 AFGAGQL 163


>ref|XP_002527924.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223532699|gb|EEF34481.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 531

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/67 (91%), Positives = 66/67 (98%)
 Frame = +3

Query: 3   GPAIFTSICQYSLGAITQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ 182
           GPAIFTSICQYSLGA+TQVF+GQVGTL+LAAVSVENSVIAGFSFG+MLGMGSALETLCGQ
Sbjct: 80  GPAIFTSICQYSLGAVTQVFSGQVGTLDLAAVSVENSVIAGFSFGIMLGMGSALETLCGQ 139

Query: 183 AFGAGQL 203
           A+GA QL
Sbjct: 140 AYGAKQL 146


>ref|XP_002329229.1| predicted protein [Populus trichocarpa] gi|222871010|gb|EEF08141.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = +3

Query: 6   PAIFTSICQYSLGAITQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQA 185
           PAIFT++CQYSLGAITQVFAG VGTL LAAVS+ENSVIAGFSFG+MLGMGSALETLCGQA
Sbjct: 29  PAIFTTVCQYSLGAITQVFAGHVGTLALAAVSIENSVIAGFSFGLMLGMGSALETLCGQA 88

Query: 186 FGAGQL 203
           FGAGQL
Sbjct: 89  FGAGQL 94


>ref|XP_002311767.1| predicted protein [Populus trichocarpa] gi|222851587|gb|EEE89134.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/67 (88%), Positives = 65/67 (97%)
 Frame = +3

Query: 3   GPAIFTSICQYSLGAITQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQ 182
           GPAIFT++CQYSLGAITQ+ AG VGTL+LAAVSVENSVIAGFSFG+MLGMGSALETLCGQ
Sbjct: 28  GPAIFTTLCQYSLGAITQLLAGHVGTLDLAAVSVENSVIAGFSFGIMLGMGSALETLCGQ 87

Query: 183 AFGAGQL 203
           A+GAGQL
Sbjct: 88  AYGAGQL 94


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