BLASTX nr result
ID: Coptis21_contig00036180
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036180 (473 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi... 213 1e-53 emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera] 213 1e-53 ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containi... 204 8e-51 ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|2... 201 5e-50 dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas] 201 7e-50 >ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990 [Vitis vinifera] Length = 523 Score = 213 bits (542), Expect = 1e-53 Identities = 98/157 (62%), Positives = 123/157 (78%) Frame = +3 Query: 3 SKCGNVGAAREVFXXXXXXXXXXWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFV 182 SKCG + A++VF WN+M+ GLA+HGLA D + ++S+M+ E+V PDSITF+ Sbjct: 200 SKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFI 259 Query: 183 GILTACSHCGLVEEGQQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPM 362 GILTACSHCGLVE+G+++F+ M+ Y I+PQLEHYG ++DLLGRAG +EEAY MIKAMPM Sbjct: 260 GILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPM 319 Query: 363 EPDIVIWRALLSACRNRGIPNFGEVAIDKMTHPESGD 473 EPDIVIWRALLSACRN P GEVAI K++H SGD Sbjct: 320 EPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGD 356 >emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera] Length = 562 Score = 213 bits (542), Expect = 1e-53 Identities = 98/157 (62%), Positives = 123/157 (78%) Frame = +3 Query: 3 SKCGNVGAAREVFXXXXXXXXXXWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFV 182 SKCG + A++VF WN+M+ GLA+HGLA D + ++S+M+ E+V PDSITF+ Sbjct: 239 SKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFI 298 Query: 183 GILTACSHCGLVEEGQQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPM 362 GILTACSHCGLVE+G+++F+ M+ Y I+PQLEHYG ++DLLGRAG +EEAY MIKAMPM Sbjct: 299 GILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPM 358 Query: 363 EPDIVIWRALLSACRNRGIPNFGEVAIDKMTHPESGD 473 EPDIVIWRALLSACRN P GEVAI K++H SGD Sbjct: 359 EPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGD 395 >ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990-like [Glycine max] Length = 569 Score = 204 bits (518), Expect = 8e-51 Identities = 96/157 (61%), Positives = 121/157 (77%) Frame = +3 Query: 3 SKCGNVGAAREVFXXXXXXXXXXWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFV 182 +KCG + +R+VF WNAM++GLA+HGLA D ++SRM+ E+VLPDSITF+ Sbjct: 246 AKCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFI 305 Query: 183 GILTACSHCGLVEEGQQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPM 362 GILTACSHCGLVEEG+++F M+ R++I+PQLEHYGT++DLLGRAG +EEAY +IK M M Sbjct: 306 GILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRM 365 Query: 363 EPDIVIWRALLSACRNRGIPNFGEVAIDKMTHPESGD 473 EPDIVIWRALLSACR GEVAI ++ ESGD Sbjct: 366 EPDIVIWRALLSACRIHRKKELGEVAIANISRLESGD 402 Score = 56.2 bits (134), Expect = 3e-06 Identities = 35/149 (23%), Positives = 66/149 (44%) Frame = +3 Query: 6 KCGNVGAAREVFXXXXXXXXXXWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVG 185 K G A++VF WN+M+ G + D ++I+ RM V PD TF Sbjct: 146 KGGQCDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFAS 205 Query: 186 ILTACSHCGLVEEGQQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPME 365 ++TAC+ G + + M + +E LID+ + GRI+ + ++ + + + Sbjct: 206 VVTACARLGALGNAKWVHGLMVEK-RVELNYILSAALIDMYAKCGRIDVSRQVFEEVARD 264 Query: 366 PDIVIWRALLSACRNRGIPNFGEVAIDKM 452 + +W A++S G+ + +M Sbjct: 265 -HVSVWNAMISGLAIHGLAMDATLVFSRM 292 >ref|XP_002318784.1| predicted protein [Populus trichocarpa] gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa] Length = 511 Score = 201 bits (511), Expect = 5e-50 Identities = 89/157 (56%), Positives = 121/157 (77%) Frame = +3 Query: 3 SKCGNVGAAREVFXXXXXXXXXXWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFV 182 SKCG + A+E+F WNAM++GLAVHGLA D + ++++M+ ENVLPD+ITF+ Sbjct: 188 SKCGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFL 247 Query: 183 GILTACSHCGLVEEGQQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPM 362 GILTACSHCGLV+EG+++F+ M++RY ++P +EHYG ++DLLGRAG +EEA+ MIK+MPM Sbjct: 248 GILTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPM 307 Query: 363 EPDIVIWRALLSACRNRGIPNFGEVAIDKMTHPESGD 473 EPD+VIWRALL ACR P GE A+ ++ SGD Sbjct: 308 EPDVVIWRALLGACRTYKKPELGEAAMANISRLRSGD 344 >dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas] Length = 514 Score = 201 bits (510), Expect = 7e-50 Identities = 90/157 (57%), Positives = 119/157 (75%) Frame = +3 Query: 3 SKCGNVGAAREVFXXXXXXXXXXWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFV 182 SKCG + A+EVF WN+++ GLAVHGLA D M ++S+M+ ENVLPDS+TF+ Sbjct: 191 SKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFL 250 Query: 183 GILTACSHCGLVEEGQQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPM 362 GIL ACSHCGLV+EG+++F+ M+ Y I+PQLEHYG ++DLLGRAG ++EAY MI AMPM Sbjct: 251 GILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPM 310 Query: 363 EPDIVIWRALLSACRNRGIPNFGEVAIDKMTHPESGD 473 EPD+++WR LLSACR GEVA+ ++ P+SGD Sbjct: 311 EPDVIVWRILLSACRTHRNTELGEVAVANISGPKSGD 347 Score = 66.2 bits (160), Expect = 3e-09 Identities = 38/149 (25%), Positives = 67/149 (44%) Frame = +3 Query: 6 KCGNVGAAREVFXXXXXXXXXXWNAMVTGLAVHGLASDVMAIYSRMKDENVLPDSITFVG 185 + G A++VF WN+M+ G +G + + + M NV PD TF Sbjct: 91 RIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFAS 150 Query: 186 ILTACSHCGLVEEGQQFFECMKTRYLIEPQLEHYGTLIDLLGRAGRIEEAYKMIKAMPME 365 ++TAC+ G + Q + M + IE LID+ + GRIE A ++ +++ Sbjct: 151 VITACARLGALNHAQWLHDLM-VQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERN 209 Query: 366 PDIVIWRALLSACRNRGIPNFGEVAIDKM 452 D+ +W +L++ G+ + KM Sbjct: 210 -DVSVWNSLINGLAVHGLALDAMMVFSKM 237