BLASTX nr result

ID: Coptis21_contig00036166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036166
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    69   5e-10
ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838...    65   6e-09
emb|CAN71623.1| hypothetical protein VITISV_025787 [Vitis vinifera]    58   9e-07
ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257...    56   3e-06

>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/59 (54%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
 Frame = -3

Query: 334 SSSKAASTLPTTP-VKQLTANELQERRSKGLCFNCNEKFFPGNHCKKLFLIELCNKEAD 161
           +S+  +  L +TP +++L+  E++ERR KGLCFNC+EKF PG+ CKKLFLIE C  E D
Sbjct: 325 NSTVTSRPLSSTPAIRRLSPTEMKERRDKGLCFNCDEKFAPGHRCKKLFLIEGCWPEED 383


>ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838891 [Brachypodium
           distachyon]
          Length = 635

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
 Frame = -3

Query: 301 TPV-KQLTANELQERRSKGLCFNCNEKFFPGNHCKKLFLIELCNKEADGDIAMENNESG* 125
           TPV K+L A E++ER++KGLCFNC+EKF  G+ CK LF IE+ +KE + D+ +       
Sbjct: 131 TPVFKKLNAAEMEERQAKGLCFNCDEKFVRGHRCKCLFYIEVADKEEEEDLQI------- 183

Query: 124 SSLLFVVPLRTRAILR------GKELLHACDVGNS 38
            SLL +  +RT   ++       +ELL   D G++
Sbjct: 184 -SLLAITGVRTSDTMQLVVWVGERELLALIDSGST 217


>emb|CAN71623.1| hypothetical protein VITISV_025787 [Vitis vinifera]
          Length = 569

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = -3

Query: 334 SSSKAASTLPTTPVKQLTANELQERRSKGLCFNCNEKFFPGNHCKKLFLIELCNKEADGD 155
           S +K        P+ +L+  ELQ RR +GLC+NC+EK+  G+ CKKLF IEL   E + +
Sbjct: 146 SGTKGTDPKRILPIXKLSPTELQRRRQQGLCYNCDEKYTMGHKCKKLFFIEL---EEENE 202

Query: 154 IAME 143
            A+E
Sbjct: 203 EAIE 206


>ref|XP_002333289.1| predicted protein [Populus trichocarpa] gi|222835888|gb|EEE74309.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 42/55 (76%)
 Frame = -3

Query: 298 PVKQLTANELQERRSKGLCFNCNEKFFPGNHCKKLFLIELCNKEADGDIAMENNE 134
           P+K+L  +E+Q+RRS+G+CFNC+EKF PG+ C+K  L+ L   E D + +++++E
Sbjct: 275 PMKRLAWDEMQKRRSQGICFNCDEKFTPGHKCQKPRLLLL---EGDDETSLQDDE 326


>ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
          Length = 787

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/67 (35%), Positives = 41/67 (61%)
 Frame = -3

Query: 355 RDRVHIDSSSKAASTLPTTPVKQLTANELQERRSKGLCFNCNEKFFPGNHCKKLFLIELC 176
           R  + +  +++    +P  P+K L+  E+Q +R++GLCFNCNE+F  G+ C+K  L+ L 
Sbjct: 222 RAPIALPQATRVDPAIPAKPIKSLSWEEMQRKRAQGLCFNCNERFTAGHRCQKPQLLLLK 281

Query: 175 NKEADGD 155
             E + D
Sbjct: 282 GHEGNVD 288