BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036154
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    89   5e-16
ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat...    89   5e-16
ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...    86   4e-15
emb|CBI21281.3| unnamed protein product [Vitis vinifera]               86   4e-15

>ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/84 (45%), Positives = 58/84 (69%)
 Frame = +3

Query: 3   LGLVELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSM 182
           L  + LGR +H ++I +G+  +V++GSALLD Y KCGC  D++K F  +P+RN V+WN++
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515

Query: 183 VSGYAQNGYWMKALEALEIMGKSG 254
           +S YAQNG     L + + M +SG
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSG 539


>ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 38/84 (45%), Positives = 58/84 (69%)
 Frame = +3

Query: 3   LGLVELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSM 182
           L  + LGR +H ++I +G+  +V++GSALLD Y KCGC  D++K F  +P+RN V+WN++
Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515

Query: 183 VSGYAQNGYWMKALEALEIMGKSG 254
           +S YAQNG     L + + M +SG
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSG 539


>ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/84 (47%), Positives = 58/84 (69%)
 Frame = +3

Query: 3   LGLVELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSM 182
           LGL++LG+ IHG+   +G+  DVF GS+L+D+Y KCG   D+ K+F+RIP RN V W SM
Sbjct: 244 LGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSM 303

Query: 183 VSGYAQNGYWMKALEALEIMGKSG 254
           ++GYAQ+  + +A+E    M   G
Sbjct: 304 IAGYAQSDLFKEAIELFREMQIGG 327


>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = +3

Query: 12  VELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSG 191
           + LG+ +H  +I +G+  +VF+GSALLDVY KCG   D+V+ F+ +P RN V+WN+M+S 
Sbjct: 468 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISA 527

Query: 192 YAQNGYWMKALEALEIMGKSGIE 260
           YAQNG     L++ + M  SG++
Sbjct: 528 YAQNGEAEATLKSFKEMVLSGLQ 550



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/81 (32%), Positives = 47/81 (58%)
 Frame = +3

Query: 15  ELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSGY 194
           E+GR IH   IV     ++  G++L+D+Y KCG F ++  +F  +  R+ V W +M+S Y
Sbjct: 368 EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAY 427

Query: 195 AQNGYWMKALEALEIMGKSGI 257
            Q G++ + L+    M ++ +
Sbjct: 428 VQKGFYEEGLQLFNKMRQASV 448


>emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = +3

Query: 12  VELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSG 191
           + LG+ +H  +I +G+  +VF+GSALLDVY KCG   D+V+ F+ +P RN V+WN+M+S 
Sbjct: 428 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISA 487

Query: 192 YAQNGYWMKALEALEIMGKSGIE 260
           YAQNG     L++ + M  SG++
Sbjct: 488 YAQNGEAEATLKSFKEMVLSGLQ 510



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/81 (32%), Positives = 47/81 (58%)
 Frame = +3

Query: 15  ELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSGY 194
           E+GR IH   IV     ++  G++L+D+Y KCG F ++  +F  +  R+ V W +M+S Y
Sbjct: 328 EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAY 387

Query: 195 AQNGYWMKALEALEIMGKSGI 257
            Q G++ + L+    M ++ +
Sbjct: 388 VQKGFYEEGLQLFNKMRQASV 408