BLASTX nr result
ID: Coptis21_contig00036154
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036154 (277 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 89 5e-16 ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat... 89 5e-16 ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containi... 87 1e-15 ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat... 86 4e-15 emb|CBI21281.3| unnamed protein product [Vitis vinifera] 86 4e-15 >ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At2g01510-like [Cucumis sativus] Length = 816 Score = 88.6 bits (218), Expect = 5e-16 Identities = 38/84 (45%), Positives = 58/84 (69%) Frame = +3 Query: 3 LGLVELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSM 182 L + LGR +H ++I +G+ +V++GSALLD Y KCGC D++K F +P+RN V+WN++ Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515 Query: 183 VSGYAQNGYWMKALEALEIMGKSG 254 +S YAQNG L + + M +SG Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSG 539 >ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein At2g01510-like [Cucumis sativus] Length = 816 Score = 88.6 bits (218), Expect = 5e-16 Identities = 38/84 (45%), Positives = 58/84 (69%) Frame = +3 Query: 3 LGLVELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSM 182 L + LGR +H ++I +G+ +V++GSALLD Y KCGC D++K F +P+RN V+WN++ Sbjct: 456 LASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNAL 515 Query: 183 VSGYAQNGYWMKALEALEIMGKSG 254 +S YAQNG L + + M +SG Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSG 539 >ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Vitis vinifera] Length = 624 Score = 87.4 bits (215), Expect = 1e-15 Identities = 40/84 (47%), Positives = 58/84 (69%) Frame = +3 Query: 3 LGLVELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSM 182 LGL++LG+ IHG+ +G+ DVF GS+L+D+Y KCG D+ K+F+RIP RN V W SM Sbjct: 244 LGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSM 303 Query: 183 VSGYAQNGYWMKALEALEIMGKSG 254 ++GYAQ+ + +A+E M G Sbjct: 304 IAGYAQSDLFKEAIELFREMQIGG 327 >ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein At2g01510-like, partial [Vitis vinifera] Length = 825 Score = 85.5 bits (210), Expect = 4e-15 Identities = 38/83 (45%), Positives = 58/83 (69%) Frame = +3 Query: 12 VELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSG 191 + LG+ +H +I +G+ +VF+GSALLDVY KCG D+V+ F+ +P RN V+WN+M+S Sbjct: 468 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISA 527 Query: 192 YAQNGYWMKALEALEIMGKSGIE 260 YAQNG L++ + M SG++ Sbjct: 528 YAQNGEAEATLKSFKEMVLSGLQ 550 Score = 63.5 bits (153), Expect = 2e-08 Identities = 26/81 (32%), Positives = 47/81 (58%) Frame = +3 Query: 15 ELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSGY 194 E+GR IH IV ++ G++L+D+Y KCG F ++ +F + R+ V W +M+S Y Sbjct: 368 EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAY 427 Query: 195 AQNGYWMKALEALEIMGKSGI 257 Q G++ + L+ M ++ + Sbjct: 428 VQKGFYEEGLQLFNKMRQASV 448 >emb|CBI21281.3| unnamed protein product [Vitis vinifera] Length = 785 Score = 85.5 bits (210), Expect = 4e-15 Identities = 38/83 (45%), Positives = 58/83 (69%) Frame = +3 Query: 12 VELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSG 191 + LG+ +H +I +G+ +VF+GSALLDVY KCG D+V+ F+ +P RN V+WN+M+S Sbjct: 428 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISA 487 Query: 192 YAQNGYWMKALEALEIMGKSGIE 260 YAQNG L++ + M SG++ Sbjct: 488 YAQNGEAEATLKSFKEMVLSGLQ 510 Score = 63.5 bits (153), Expect = 2e-08 Identities = 26/81 (32%), Positives = 47/81 (58%) Frame = +3 Query: 15 ELGRMIHGVMIVNGYCEDVFAGSALLDVYVKCGCFGDSVKLFERIPQRNEVTWNSMVSGY 194 E+GR IH IV ++ G++L+D+Y KCG F ++ +F + R+ V W +M+S Y Sbjct: 328 EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAY 387 Query: 195 AQNGYWMKALEALEIMGKSGI 257 Q G++ + L+ M ++ + Sbjct: 388 VQKGFYEEGLQLFNKMRQASV 408