BLASTX nr result
ID: Coptis21_contig00036137
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036137 (249 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|2... 92 1e-17 ref|XP_002306087.1| predicted protein [Populus trichocarpa] gi|2... 92 1e-17 ref|XP_002313059.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-17 ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat... 88 6e-17 emb|CBI32560.3| unnamed protein product [Vitis vinifera] 88 6e-17 >ref|XP_002306089.1| predicted protein [Populus trichocarpa] gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa] Length = 677 Score = 92.0 bits (227), Expect(2) = 1e-17 Identities = 42/72 (58%), Positives = 57/72 (79%) Frame = +1 Query: 1 LISGYAQNGCWGKALELFVLMGEIGMRWNEHTFTSVLSACSSLKSQKHGREVHAWVLKNG 180 LISGY QNG +AL+LFV MGE G++WNEHTF SVLSAC+ L++ K G+E+HAW+LKNG Sbjct: 230 LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNG 289 Query: 181 LCLNPYISSDVL 216 L + ++ S ++ Sbjct: 290 LGSSAFVESGIV 301 Score = 22.3 bits (46), Expect(2) = 1e-17 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = +2 Query: 203 VVMYCTCDNIGYAE 244 V +YC C N+ YAE Sbjct: 301 VDVYCKCGNMKYAE 314 >ref|XP_002306087.1| predicted protein [Populus trichocarpa] gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa] Length = 677 Score = 92.0 bits (227), Expect(2) = 1e-17 Identities = 42/72 (58%), Positives = 57/72 (79%) Frame = +1 Query: 1 LISGYAQNGCWGKALELFVLMGEIGMRWNEHTFTSVLSACSSLKSQKHGREVHAWVLKNG 180 LISGY QNG +AL+LFV MGE G++WNEHTF SVLSAC+ L++ K G+E+HAW+LKNG Sbjct: 230 LISGYVQNGYPVEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNG 289 Query: 181 LCLNPYISSDVL 216 L + ++ S ++ Sbjct: 290 LGSSAFVESGIV 301 Score = 22.3 bits (46), Expect(2) = 1e-17 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = +2 Query: 203 VVMYCTCDNIGYAE 244 V +YC C N+ YAE Sbjct: 301 VDVYCKCGNMKYAE 314 >ref|XP_002313059.1| predicted protein [Populus trichocarpa] gi|222849467|gb|EEE87014.1| predicted protein [Populus trichocarpa] Length = 677 Score = 92.4 bits (228), Expect = 3e-17 Identities = 42/72 (58%), Positives = 57/72 (79%) Frame = +1 Query: 1 LISGYAQNGCWGKALELFVLMGEIGMRWNEHTFTSVLSACSSLKSQKHGREVHAWVLKNG 180 LISGY QNG +AL+LFV MGE G++WNEHTF SVLSAC+ L++ K G+E+HAW+LKNG Sbjct: 230 LISGYVQNGYPLEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNG 289 Query: 181 LCLNPYISSDVL 216 L + ++ S ++ Sbjct: 290 LSSSAFVESGIV 301 >ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein At3g18840-like [Vitis vinifera] Length = 670 Score = 88.2 bits (217), Expect(2) = 6e-17 Identities = 43/72 (59%), Positives = 52/72 (72%) Frame = +1 Query: 1 LISGYAQNGCWGKALELFVLMGEIGMRWNEHTFTSVLSACSSLKSQKHGREVHAWVLKNG 180 LISGY QNGC AL+LFV M E +RWNEHT +LSAC+ L+S K G+EVH WVLK Sbjct: 228 LISGYVQNGCEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYE 287 Query: 181 LCLNPYISSDVL 216 L NP+ISS ++ Sbjct: 288 LGFNPFISSGLV 299 Score = 23.9 bits (50), Expect(2) = 6e-17 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 203 VVMYCTCDNIGYAEL 247 V +YC C N+ YAEL Sbjct: 299 VDVYCKCGNMKYAEL 313 >emb|CBI32560.3| unnamed protein product [Vitis vinifera] Length = 553 Score = 88.2 bits (217), Expect(2) = 6e-17 Identities = 43/72 (59%), Positives = 52/72 (72%) Frame = +1 Query: 1 LISGYAQNGCWGKALELFVLMGEIGMRWNEHTFTSVLSACSSLKSQKHGREVHAWVLKNG 180 LISGY QNGC AL+LFV M E +RWNEHT +LSAC+ L+S K G+EVH WVLK Sbjct: 228 LISGYVQNGCEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYE 287 Query: 181 LCLNPYISSDVL 216 L NP+ISS ++ Sbjct: 288 LGFNPFISSGLV 299 Score = 23.9 bits (50), Expect(2) = 6e-17 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 203 VVMYCTCDNIGYAEL 247 V +YC C N+ YAEL Sbjct: 299 VDVYCKCGNMKYAEL 313