BLASTX nr result

ID: Coptis21_contig00036124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036124
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK00606.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   3e-07
gb|EEC85061.1| hypothetical protein OsI_32397 [Oryza sativa Indi...    57   1e-06
gb|EEC66595.1| hypothetical protein OsI_32811 [Oryza sativa Indi...    57   2e-06
gb|EAZ15399.1| hypothetical protein OsJ_30809 [Oryza sativa Japo...    56   3e-06
ref|XP_003561191.1| PREDICTED: uncharacterized protein LOC100822...    56   3e-06

>dbj|BAK00606.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 866

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/55 (45%), Positives = 33/55 (60%)
 Frame = +3

Query: 63  KLAQFPGCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAGFNLQLVEI 227
           +L   PGC   CG V I YPFGIG GC  PGFE+TC  S+ +L      +Q++ +
Sbjct: 186 RLTSKPGCQESCGGVDIPYPFGIGHGCFRPGFEITCVNSMPILANTSDAIQVLSL 240


>gb|EEC85061.1| hypothetical protein OsI_32397 [Oryza sativa Indica Group]
          Length = 383

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +3

Query: 78  PGCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSIS--MLVAAGFNLQLVEILL 233
           PGC  RCGDV + +PFGI +GC   GF +TCN + +   L+     LQ+VEILL
Sbjct: 39  PGCPDRCGDVKVPFPFGIRDGCSLAGFGLTCNNATNPPRLMVGNGTLQVVEILL 92


>gb|EEC66595.1| hypothetical protein OsI_32811 [Oryza sativa Indica Group]
          Length = 667

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/44 (52%), Positives = 25/44 (56%)
 Frame = +3

Query: 81  GCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAGFNL 212
           GC G CG VGI YPFGIG GC  PG E+ C      L  +G  L
Sbjct: 14  GCPGNCGGVGIPYPFGIGAGCFRPGLEIICKNDAPFLAGSGNQL 57


>gb|EAZ15399.1| hypothetical protein OsJ_30809 [Oryza sativa Japonica Group]
          Length = 687

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/44 (52%), Positives = 26/44 (59%)
 Frame = +3

Query: 81  GCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAGFNL 212
           GC G CG VGI YPFGIG GC   GFE+ C      L  +G +L
Sbjct: 33  GCPGNCGGVGIPYPFGIGAGCFRRGFEIICKNDAPFLAGSGADL 76


>ref|XP_003561191.1| PREDICTED: uncharacterized protein LOC100822399 [Brachypodium
           distachyon]
          Length = 1362

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
 Frame = +3

Query: 78  PGCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAG-----FNLQLVEI 227
           PGC  +CG+V I YPFG G+GC    F+VTCN++ + L + G      NL L E+
Sbjct: 152 PGCLDKCGNVSIPYPFGTGKGCFQEPFDVTCNETGAYLASTGVRVLDINLTLGEV 206


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