BLASTX nr result
ID: Coptis21_contig00036124
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036124 (275 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAK00606.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 3e-07 gb|EEC85061.1| hypothetical protein OsI_32397 [Oryza sativa Indi... 57 1e-06 gb|EEC66595.1| hypothetical protein OsI_32811 [Oryza sativa Indi... 57 2e-06 gb|EAZ15399.1| hypothetical protein OsJ_30809 [Oryza sativa Japo... 56 3e-06 ref|XP_003561191.1| PREDICTED: uncharacterized protein LOC100822... 56 3e-06 >dbj|BAK00606.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 866 Score = 59.3 bits (142), Expect = 3e-07 Identities = 25/55 (45%), Positives = 33/55 (60%) Frame = +3 Query: 63 KLAQFPGCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAGFNLQLVEI 227 +L PGC CG V I YPFGIG GC PGFE+TC S+ +L +Q++ + Sbjct: 186 RLTSKPGCQESCGGVDIPYPFGIGHGCFRPGFEITCVNSMPILANTSDAIQVLSL 240 >gb|EEC85061.1| hypothetical protein OsI_32397 [Oryza sativa Indica Group] Length = 383 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 2/54 (3%) Frame = +3 Query: 78 PGCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSIS--MLVAAGFNLQLVEILL 233 PGC RCGDV + +PFGI +GC GF +TCN + + L+ LQ+VEILL Sbjct: 39 PGCPDRCGDVKVPFPFGIRDGCSLAGFGLTCNNATNPPRLMVGNGTLQVVEILL 92 >gb|EEC66595.1| hypothetical protein OsI_32811 [Oryza sativa Indica Group] Length = 667 Score = 56.6 bits (135), Expect = 2e-06 Identities = 23/44 (52%), Positives = 25/44 (56%) Frame = +3 Query: 81 GCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAGFNL 212 GC G CG VGI YPFGIG GC PG E+ C L +G L Sbjct: 14 GCPGNCGGVGIPYPFGIGAGCFRPGLEIICKNDAPFLAGSGNQL 57 >gb|EAZ15399.1| hypothetical protein OsJ_30809 [Oryza sativa Japonica Group] Length = 687 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/44 (52%), Positives = 26/44 (59%) Frame = +3 Query: 81 GCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAGFNL 212 GC G CG VGI YPFGIG GC GFE+ C L +G +L Sbjct: 33 GCPGNCGGVGIPYPFGIGAGCFRRGFEIICKNDAPFLAGSGADL 76 >ref|XP_003561191.1| PREDICTED: uncharacterized protein LOC100822399 [Brachypodium distachyon] Length = 1362 Score = 55.8 bits (133), Expect = 3e-06 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 5/55 (9%) Frame = +3 Query: 78 PGCAGRCGDVGISYPFGIGEGCLSPGFEVTCNQSISMLVAAG-----FNLQLVEI 227 PGC +CG+V I YPFG G+GC F+VTCN++ + L + G NL L E+ Sbjct: 152 PGCLDKCGNVSIPYPFGTGKGCFQEPFDVTCNETGAYLASTGVRVLDINLTLGEV 206