BLASTX nr result

ID: Coptis21_contig00036123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036123
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241...   100   1e-19
emb|CBI18109.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002526678.1| breast cancer type 2 susceptibility protein ...    83   2e-14
ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabido...    69   4e-10

>ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera]
          Length = 1126

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/80 (57%), Positives = 61/80 (76%)
 Frame = +2

Query: 116 PLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRSTRFSTPLTSNIS 295
           PLGRSSGGPLVD+SN I T   ++K    EKR LG+RSSISPFK PRS++F  PL SN+S
Sbjct: 377 PLGRSSGGPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVS 436

Query: 296 FLRNGSTALKAEESCCKGKI 355
           F+ NG + L +E++CC+ ++
Sbjct: 437 FVPNGLSTLASEDTCCRKRV 456


>emb|CBI18109.3| unnamed protein product [Vitis vinifera]
          Length = 1134

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/80 (57%), Positives = 61/80 (76%)
 Frame = +2

Query: 116 PLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRSTRFSTPLTSNIS 295
           PLGRSSGGPLVD+SN I T   ++K    EKR LG+RSSISPFK PRS++F  PL SN+S
Sbjct: 400 PLGRSSGGPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVS 459

Query: 296 FLRNGSTALKAEESCCKGKI 355
           F+ NG + L +E++CC+ ++
Sbjct: 460 FVPNGLSTLASEDTCCRKRV 479


>ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis] gi|223533978|gb|EEF35700.1| breast
           cancer type 2 susceptibility protein brca2, putative
           [Ricinus communis]
          Length = 1156

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/85 (50%), Positives = 56/85 (65%)
 Frame = +2

Query: 83  SLAKEIGPRTIPLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRST 262
           SLA  IG R   L RSS GPLVDISN I + Y + +H   EK+ +G+RSS SPFK PRS 
Sbjct: 377 SLAHGIGSRINLLARSSSGPLVDISNTIGSCYTNHRHDNIEKKRVGRRSSTSPFKRPRSC 436

Query: 263 RFSTPLTSNISFLRNGSTALKAEES 337
           +F+TPL  N ++  +G +A  +E S
Sbjct: 437 KFTTPLNRNYAYAPSGLSASSSENS 461


>ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1|
           predicted protein [Populus trichocarpa]
          Length = 1186

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/83 (48%), Positives = 54/83 (65%)
 Frame = +2

Query: 107 RTIPLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRSTRFSTPLTS 286
           R IPL +S   PL DISN I TAY++      EKR LG+  SISPFK PRS++F+TPL  
Sbjct: 448 RMIPLQKSLCAPLPDISNTIGTAYSNNGQANGEKRKLGRGISISPFKKPRSSKFTTPLNR 507

Query: 287 NISFLRNGSTALKAEESCCKGKI 355
           N+S + +G + +  E S C+ K+
Sbjct: 508 NVSSVPSGLSTVSYESSSCRKKV 530


>ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabidopsis thaliana]
           gi|31335362|emb|CAD32572.1| breast cancer susceptibility
           protein 2b [Arabidopsis thaliana]
           gi|332002986|gb|AED90369.1| breast cancer 2
           susceptibility protein [Arabidopsis thaliana]
          Length = 1155

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/88 (42%), Positives = 48/88 (54%)
 Frame = +2

Query: 68  MHVGKSLAKEIGPRTIPLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFK 247
           M V  S      PR   LGR +  PLVDI+N  DTAYA+ K    +K+ LGK  S+SPFK
Sbjct: 403 MAVNNSKGNGFIPRARQLGRPADQPLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFK 462

Query: 248 MPRSTRFSTPLTSNISFLRNGSTALKAE 331
            PR + F TPL  N     +G + +  +
Sbjct: 463 RPRISSFKTPLKKNAQQASSGLSVVSCD 490


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