BLASTX nr result
ID: Coptis21_contig00036123
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036123 (355 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241... 100 1e-19 emb|CBI18109.3| unnamed protein product [Vitis vinifera] 100 1e-19 ref|XP_002526678.1| breast cancer type 2 susceptibility protein ... 83 2e-14 ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|2... 79 4e-13 ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabido... 69 4e-10 >ref|XP_002264351.2| PREDICTED: uncharacterized protein LOC100241398 [Vitis vinifera] Length = 1126 Score = 100 bits (249), Expect = 1e-19 Identities = 46/80 (57%), Positives = 61/80 (76%) Frame = +2 Query: 116 PLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRSTRFSTPLTSNIS 295 PLGRSSGGPLVD+SN I T ++K EKR LG+RSSISPFK PRS++F PL SN+S Sbjct: 377 PLGRSSGGPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVS 436 Query: 296 FLRNGSTALKAEESCCKGKI 355 F+ NG + L +E++CC+ ++ Sbjct: 437 FVPNGLSTLASEDTCCRKRV 456 >emb|CBI18109.3| unnamed protein product [Vitis vinifera] Length = 1134 Score = 100 bits (249), Expect = 1e-19 Identities = 46/80 (57%), Positives = 61/80 (76%) Frame = +2 Query: 116 PLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRSTRFSTPLTSNIS 295 PLGRSSGGPLVD+SN I T ++K EKR LG+RSSISPFK PRS++F PL SN+S Sbjct: 400 PLGRSSGGPLVDVSNRIGTLLTNKKQTITEKRRLGRRSSISPFKRPRSSKFCPPLNSNVS 459 Query: 296 FLRNGSTALKAEESCCKGKI 355 F+ NG + L +E++CC+ ++ Sbjct: 460 FVPNGLSTLASEDTCCRKRV 479 >ref|XP_002526678.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus communis] gi|223533978|gb|EEF35700.1| breast cancer type 2 susceptibility protein brca2, putative [Ricinus communis] Length = 1156 Score = 83.2 bits (204), Expect = 2e-14 Identities = 43/85 (50%), Positives = 56/85 (65%) Frame = +2 Query: 83 SLAKEIGPRTIPLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRST 262 SLA IG R L RSS GPLVDISN I + Y + +H EK+ +G+RSS SPFK PRS Sbjct: 377 SLAHGIGSRINLLARSSSGPLVDISNTIGSCYTNHRHDNIEKKRVGRRSSTSPFKRPRSC 436 Query: 263 RFSTPLTSNISFLRNGSTALKAEES 337 +F+TPL N ++ +G +A +E S Sbjct: 437 KFTTPLNRNYAYAPSGLSASSSENS 461 >ref|XP_002320595.1| predicted protein [Populus trichocarpa] gi|222861368|gb|EEE98910.1| predicted protein [Populus trichocarpa] Length = 1186 Score = 79.0 bits (193), Expect = 4e-13 Identities = 40/83 (48%), Positives = 54/83 (65%) Frame = +2 Query: 107 RTIPLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFKMPRSTRFSTPLTS 286 R IPL +S PL DISN I TAY++ EKR LG+ SISPFK PRS++F+TPL Sbjct: 448 RMIPLQKSLCAPLPDISNTIGTAYSNNGQANGEKRKLGRGISISPFKKPRSSKFTTPLNR 507 Query: 287 NISFLRNGSTALKAEESCCKGKI 355 N+S + +G + + E S C+ K+ Sbjct: 508 NVSSVPSGLSTVSYESSSCRKKV 530 >ref|NP_195783.3| breast cancer 2 susceptibility protein [Arabidopsis thaliana] gi|31335362|emb|CAD32572.1| breast cancer susceptibility protein 2b [Arabidopsis thaliana] gi|332002986|gb|AED90369.1| breast cancer 2 susceptibility protein [Arabidopsis thaliana] Length = 1155 Score = 68.9 bits (167), Expect = 4e-10 Identities = 37/88 (42%), Positives = 48/88 (54%) Frame = +2 Query: 68 MHVGKSLAKEIGPRTIPLGRSSGGPLVDISNNIDTAYADQKHFPREKRSLGKRSSISPFK 247 M V S PR LGR + PLVDI+N DTAYA+ K +K+ LGK S+SPFK Sbjct: 403 MAVNNSKGNGFIPRARQLGRPADQPLVDITNRRDTAYANNKQDSTQKKRLGKTVSVSPFK 462 Query: 248 MPRSTRFSTPLTSNISFLRNGSTALKAE 331 PR + F TPL N +G + + + Sbjct: 463 RPRISSFKTPLKKNAQQASSGLSVVSCD 490