BLASTX nr result

ID: Coptis21_contig00036109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036109
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316491.1| cationic amino acid transporter [Populus tri...   182   2e-44
emb|CBI25025.3| unnamed protein product [Vitis vinifera]              180   1e-43
ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid...   180   1e-43
ref|XP_004169173.1| PREDICTED: cationic amino acid transporter 6...   178   4e-43
ref|XP_004140991.1| PREDICTED: cationic amino acid transporter 7...   178   4e-43

>ref|XP_002316491.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222865531|gb|EEF02662.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 600

 Score =  182 bits (463), Expect = 2e-44
 Identities = 86/107 (80%), Positives = 95/107 (88%)
 Frame = -2

Query: 323 LNMVLTALHILFITFVIAIGFWKGDWKNLTEPKDSSKPSGFFPYGVSGVFNGAAMVYLSY 144
           +NMVLTALHILFI FVI +GFWKGDWKN TEP D   PSGFFP+G  GVFNGAAMVYLSY
Sbjct: 223 VNMVLTALHILFIGFVILMGFWKGDWKNFTEPADPKNPSGFFPFGAPGVFNGAAMVYLSY 282

Query: 143 IGYDAVSTMAEEVKNPSKDIPIGVSGSVVLVTVIYCLMAASMSKLVP 3
           IGYDAVST+AEEV NP KDIPIGVSGSV++VTV+YCLM+ASMS L+P
Sbjct: 283 IGYDAVSTLAEEVHNPVKDIPIGVSGSVIIVTVLYCLMSASMSMLLP 329


>emb|CBI25025.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/108 (78%), Positives = 97/108 (89%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 LNMVLTALHILFITFVIAIGFWKGDWKNLTEPKDSSK-PSGFFPYGVSGVFNGAAMVYLS 147
           +NMVLTA+HILFI FVI +GFW+GDWKN TEP D  +   GFFP+G SGVFNGAAMVYLS
Sbjct: 159 VNMVLTAMHILFIAFVIVVGFWRGDWKNFTEPADPRRHQGGFFPFGASGVFNGAAMVYLS 218

Query: 146 YIGYDAVSTMAEEVKNPSKDIPIGVSGSVVLVTVIYCLMAASMSKLVP 3
           YIGYDAVST+AEEV+NP KDIPIGVSGSV+LVT++YCLMAASMSKL+P
Sbjct: 219 YIGYDAVSTLAEEVRNPVKDIPIGVSGSVMLVTILYCLMAASMSKLLP 266


>ref|XP_002269556.1| PREDICTED: high affinity cationic amino acid transporter 1 [Vitis
           vinifera]
          Length = 586

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/108 (78%), Positives = 97/108 (89%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 LNMVLTALHILFITFVIAIGFWKGDWKNLTEPKDSSK-PSGFFPYGVSGVFNGAAMVYLS 147
           +NMVLTA+HILFI FVI +GFW+GDWKN TEP D  +   GFFP+G SGVFNGAAMVYLS
Sbjct: 209 VNMVLTAMHILFIAFVIVVGFWRGDWKNFTEPADPRRHQGGFFPFGASGVFNGAAMVYLS 268

Query: 146 YIGYDAVSTMAEEVKNPSKDIPIGVSGSVVLVTVIYCLMAASMSKLVP 3
           YIGYDAVST+AEEV+NP KDIPIGVSGSV+LVT++YCLMAASMSKL+P
Sbjct: 269 YIGYDAVSTLAEEVRNPVKDIPIGVSGSVMLVTILYCLMAASMSKLLP 316


>ref|XP_004169173.1| PREDICTED: cationic amino acid transporter 6, chloroplastic-like
           [Cucumis sativus]
          Length = 417

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/107 (77%), Positives = 95/107 (88%)
 Frame = -2

Query: 323 LNMVLTALHILFITFVIAIGFWKGDWKNLTEPKDSSKPSGFFPYGVSGVFNGAAMVYLSY 144
           +NM LTA+HILFI FVI  GFWKGDWKN TEP D    SGFFP+G +GVF GA++VYLSY
Sbjct: 207 VNMTLTAIHILFIAFVIVFGFWKGDWKNFTEPGDPKNESGFFPHGAAGVFKGASLVYLSY 266

Query: 143 IGYDAVSTMAEEVKNPSKDIPIGVSGSVVLVTVIYCLMAASMSKLVP 3
           IGYDAVSTMAEEV++P+KDIPIGVSGSVVLVTV+YCLMAASM+KL+P
Sbjct: 267 IGYDAVSTMAEEVRSPAKDIPIGVSGSVVLVTVLYCLMAASMAKLLP 313


>ref|XP_004140991.1| PREDICTED: cationic amino acid transporter 7, chloroplastic-like
           [Cucumis sativus]
          Length = 617

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/107 (77%), Positives = 95/107 (88%)
 Frame = -2

Query: 323 LNMVLTALHILFITFVIAIGFWKGDWKNLTEPKDSSKPSGFFPYGVSGVFNGAAMVYLSY 144
           +NM LTA+HILFI FVI  GFWKGDWKN TEP D    SGFFP+G +GVF GA++VYLSY
Sbjct: 250 VNMTLTAIHILFIAFVIVFGFWKGDWKNFTEPGDPKNESGFFPHGAAGVFKGASLVYLSY 309

Query: 143 IGYDAVSTMAEEVKNPSKDIPIGVSGSVVLVTVIYCLMAASMSKLVP 3
           IGYDAVSTMAEEV++P+KDIPIGVSGSVVLVTV+YCLMAASM+KL+P
Sbjct: 310 IGYDAVSTMAEEVRSPAKDIPIGVSGSVVLVTVLYCLMAASMAKLLP 356


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