BLASTX nr result

ID: Coptis21_contig00036108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036108
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269342.2| PREDICTED: uncharacterized protein LOC100253...    66   3e-09
emb|CBI31945.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002315045.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002269342.2| PREDICTED: uncharacterized protein LOC100253313 [Vitis vinifera]
          Length = 432

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = -2

Query: 263 HDMTSYFKQNRSWDRPGDD--STYTGLYTHHSPLMMAMQQSNQQCQSYFSDSKTSTSHIS 90
           HDM S F Q+RSWDRP D+  +  +G Y  + PLMMAMQQSN      F +S  ST   S
Sbjct: 342 HDMISMFSQHRSWDRPRDEPNNNTSGFYPQYPPLMMAMQQSNYHNTCNFPNSTASTPQAS 401

Query: 89  VTEASSS 69
            TE SSS
Sbjct: 402 ATEPSSS 408


>emb|CBI31945.3| unnamed protein product [Vitis vinifera]
          Length = 336

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = -2

Query: 263 HDMTSYFKQNRSWDRPGDD--STYTGLYTHHSPLMMAMQQSNQQCQSYFSDSKTSTSHIS 90
           HDM S F Q+RSWDRP D+  +  +G Y  + PLMMAMQQSN      F +S  ST   S
Sbjct: 246 HDMISMFSQHRSWDRPRDEPNNNTSGFYPQYPPLMMAMQQSNYHNTCNFPNSTASTPQAS 305

Query: 89  VTEASSS 69
            TE SSS
Sbjct: 306 ATEPSSS 312


>ref|XP_002315045.1| predicted protein [Populus trichocarpa] gi|222864085|gb|EEF01216.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
 Frame = -2

Query: 260 DMTSYFKQNRSWDRPGDDSTYTGLY-THHSPLMMAMQQSNQQCQSYFSDSKTST--SHIS 90
           DM   F Q RSWDRP ++   +G Y  H+ P +MA QQSN Q    FSD   ST    +S
Sbjct: 316 DMLGMFSQTRSWDRPNEEPHISGFYPQHYPPYLMATQQSNYQNPYCFSDFTASTLPQEVS 375

Query: 89  VTEASSSS 66
           V++ S SS
Sbjct: 376 VSQPSPSS 383


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