BLASTX nr result
ID: Coptis21_contig00036101
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036101 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio... 71 8e-11 emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] 71 8e-11 emb|CBI32503.3| unnamed protein product [Vitis vinifera] 71 1e-10 ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_003533097.1| PREDICTED: B3 domain-containing transcriptio... 68 7e-10 >ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Vitis vinifera] Length = 407 Score = 71.2 bits (173), Expect = 8e-11 Identities = 37/128 (28%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Frame = +1 Query: 97 KYSRKEALMMKRRLKTQGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYM-PIPKKFSKK 273 K S + + R + + K ++ A F+ S P+ + ++ SYV+ ++ +P +F++K Sbjct: 266 KTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEK 325 Query: 274 YLPEGLDSLTIQASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKE 453 YL G+ +S+ ++W V C + +++ +G +F++++ ++ GD+C FELIN E Sbjct: 326 YL-NGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINME 384 Query: 454 DAVLKLNI 477 D VLK++I Sbjct: 385 DVVLKVSI 392 >emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] Length = 563 Score = 71.2 bits (173), Expect = 8e-11 Identities = 37/128 (28%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Frame = +1 Query: 97 KYSRKEALMMKRRLKTQGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYM-PIPKKFSKK 273 K S + + R + + K ++ A F+ S P+ + ++ SYV+ ++ +P +F++K Sbjct: 422 KTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEK 481 Query: 274 YLPEGLDSLTIQASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKE 453 YL G+ +S+ ++W V C + +++ +G +F++++ ++ GD+C FELIN E Sbjct: 482 YL-NGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINME 540 Query: 454 DAVLKLNI 477 D VLK++I Sbjct: 541 DVVLKVSI 548 >emb|CBI32503.3| unnamed protein product [Vitis vinifera] Length = 355 Score = 70.9 bits (172), Expect = 1e-10 Identities = 35/117 (29%), Positives = 71/117 (60%), Gaps = 1/117 (0%) Frame = +1 Query: 130 RRLKTQGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYM-PIPKKFSKKYLPEGLDSLTI 306 R + + K ++ A F+ S P+ + ++ SYV+ ++ +P +F++KYL G+ Sbjct: 225 RVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYL-NGVSKFIK 283 Query: 307 QASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKEDAVLKLNI 477 +S+ ++W V C + +++ +G +F++++ ++ GD+C FELIN ED VLK++I Sbjct: 284 LQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSI 340 >ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1| predicted protein [Populus trichocarpa] Length = 321 Score = 70.1 bits (170), Expect = 2e-10 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Frame = +1 Query: 112 EALMMKRRLKT-QGKDGSIQIAGSFKSSYPYFIIYVQSSYV-NGIYMPIPKKFSKKYLPE 285 E L +RR T + K+ +I+ A F+S P+F + ++ SYV G + IP F++ +L Sbjct: 184 ETLTRRRRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSSFARTFLNT 243 Query: 286 GLDSLTIQASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKEDAVL 465 +T+Q S + ++W V C + ++ +G +F+ E+ ++ GD+C FELI+ ++ VL Sbjct: 244 VTGFVTLQVS-DGKQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELIHAKEIVL 302 Query: 466 KLNI 477 K+ + Sbjct: 303 KVAV 306 >ref|XP_003533097.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Glycine max] Length = 430 Score = 68.2 bits (165), Expect = 7e-10 Identities = 33/102 (32%), Positives = 60/102 (58%) Frame = +1 Query: 145 QGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYMPIPKKFSKKYLPEGLDSLTIQASSER 324 Q +++ A +F+S +P+F + ++ S++NG Y+ IP +F+++YL + ++ I + Sbjct: 212 QSTSTALKKASTFRSEHPFFRLVMKPSFINGYYLEIPPQFAERYLKK-THAIVILEILDG 270 Query: 325 RKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINK 450 R W V C + R+ G KF E+ + +GD+C FELI K Sbjct: 271 RTWSVIC----SATRLTEGWQKFASENNLNVGDVCVFELIQK 308