BLASTX nr result

ID: Coptis21_contig00036101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036101
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    71   8e-11
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    71   8e-11
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_003533097.1| PREDICTED: B3 domain-containing transcriptio...    68   7e-10

>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/128 (28%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  KYSRKEALMMKRRLKTQGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYM-PIPKKFSKK 273
           K S + +    R +  + K  ++  A  F+ S P+  + ++ SYV+  ++  +P +F++K
Sbjct: 266 KTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEK 325

Query: 274 YLPEGLDSLTIQASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKE 453
           YL  G+       +S+ ++W V C    + +++ +G  +F++++ ++ GD+C FELIN E
Sbjct: 326 YL-NGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINME 384

Query: 454 DAVLKLNI 477
           D VLK++I
Sbjct: 385 DVVLKVSI 392


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/128 (28%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  KYSRKEALMMKRRLKTQGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYM-PIPKKFSKK 273
           K S + +    R +  + K  ++  A  F+ S P+  + ++ SYV+  ++  +P +F++K
Sbjct: 422 KTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEK 481

Query: 274 YLPEGLDSLTIQASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKE 453
           YL  G+       +S+ ++W V C    + +++ +G  +F++++ ++ GD+C FELIN E
Sbjct: 482 YL-NGVSKFIKLQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINME 540

Query: 454 DAVLKLNI 477
           D VLK++I
Sbjct: 541 DVVLKVSI 548


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/117 (29%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
 Frame = +1

Query: 130 RRLKTQGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYM-PIPKKFSKKYLPEGLDSLTI 306
           R +  + K  ++  A  F+ S P+  + ++ SYV+  ++  +P +F++KYL  G+     
Sbjct: 225 RVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYL-NGVSKFIK 283

Query: 307 QASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKEDAVLKLNI 477
             +S+ ++W V C    + +++ +G  +F++++ ++ GD+C FELIN ED VLK++I
Sbjct: 284 LQTSDGKQWHVRCLSGESRVKLSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSI 340


>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = +1

Query: 112 EALMMKRRLKT-QGKDGSIQIAGSFKSSYPYFIIYVQSSYV-NGIYMPIPKKFSKKYLPE 285
           E L  +RR  T + K+ +I+ A  F+S  P+F + ++ SYV  G  + IP  F++ +L  
Sbjct: 184 ETLTRRRRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSSFARTFLNT 243

Query: 286 GLDSLTIQASSERRKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINKEDAVL 465
               +T+Q S + ++W V C   +   ++ +G  +F+ E+ ++ GD+C FELI+ ++ VL
Sbjct: 244 VTGFVTLQVS-DGKQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELIHAKEIVL 302

Query: 466 KLNI 477
           K+ +
Sbjct: 303 KVAV 306


>ref|XP_003533097.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 430

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/102 (32%), Positives = 60/102 (58%)
 Frame = +1

Query: 145 QGKDGSIQIAGSFKSSYPYFIIYVQSSYVNGIYMPIPKKFSKKYLPEGLDSLTIQASSER 324
           Q    +++ A +F+S +P+F + ++ S++NG Y+ IP +F+++YL +   ++ I    + 
Sbjct: 212 QSTSTALKKASTFRSEHPFFRLVMKPSFINGYYLEIPPQFAERYLKK-THAIVILEILDG 270

Query: 325 RKWQVGCHLNNTHMRMCRGLAKFLRESGVKLGDICAFELINK 450
           R W V C    +  R+  G  KF  E+ + +GD+C FELI K
Sbjct: 271 RTWSVIC----SATRLTEGWQKFASENNLNVGDVCVFELIQK 308


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