BLASTX nr result

ID: Coptis21_contig00036084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036084
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-l...   179   3e-43
ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent hel...   179   3e-43
emb|CBI15784.3| unnamed protein product [Vitis vinifera]              179   3e-43
emb|CAN79469.1| hypothetical protein VITISV_016935 [Vitis vinifera]   179   3e-43
ref|XP_002461224.1| hypothetical protein SORBIDRAFT_02g043160 [S...   177   6e-43

>ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis sativus]
          Length = 906

 Score =  179 bits (453), Expect = 3e-43
 Identities = 82/93 (88%), Positives = 85/93 (91%)
 Frame = -3

Query: 288 GIYHGQMSGKVREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQE 109
           GIYHGQM  K R ESHR FIRDEV VMVATVAFGMGIDKPNIR VIHYGCPKSLESYYQE
Sbjct: 256 GIYHGQMDKKSRAESHRLFIRDEVQVMVATVAFGMGIDKPNIRLVIHYGCPKSLESYYQE 315

Query: 108 SGRCGRDGLASICWLYYTRSDFTKADFFCGESQ 10
           SGRCGRDG+AS+CWLYYTRSDF KADF+CGESQ
Sbjct: 316 SGRCGRDGIASVCWLYYTRSDFAKADFYCGESQ 348


>ref|XP_002275696.2| PREDICTED: Werner syndrome ATP-dependent helicase-like [Vitis
           vinifera]
          Length = 913

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/96 (83%), Positives = 86/96 (89%)
 Frame = -3

Query: 288 GIYHGQMSGKVREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQE 109
           GIYHGQM+   REESHR FIRDEVHVMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQE
Sbjct: 256 GIYHGQMANSAREESHRIFIRDEVHVMVATIAFGMGIDKPNIRHVIHYGCPKSLESYYQE 315

Query: 108 SGRCGRDGLASICWLYYTRSDFTKADFFCGESQGIQ 1
           SGRCGRDG+AS+CWLYY R DF KADF+CGE+ G Q
Sbjct: 316 SGRCGRDGIASVCWLYYNRGDFMKADFYCGEATGNQ 351


>emb|CBI15784.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/96 (83%), Positives = 86/96 (89%)
 Frame = -3

Query: 288 GIYHGQMSGKVREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQE 109
           GIYHGQM+   REESHR FIRDEVHVMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQE
Sbjct: 256 GIYHGQMANSAREESHRIFIRDEVHVMVATIAFGMGIDKPNIRHVIHYGCPKSLESYYQE 315

Query: 108 SGRCGRDGLASICWLYYTRSDFTKADFFCGESQGIQ 1
           SGRCGRDG+AS+CWLYY R DF KADF+CGE+ G Q
Sbjct: 316 SGRCGRDGIASVCWLYYNRGDFMKADFYCGEATGNQ 351


>emb|CAN79469.1| hypothetical protein VITISV_016935 [Vitis vinifera]
          Length = 447

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/96 (83%), Positives = 86/96 (89%)
 Frame = -3

Query: 288 GIYHGQMSGKVREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQE 109
           GIYHGQM+   REESHR FIRDEVHVMVAT+AFGMGIDKPNIR VIHYGCPKSLESYYQE
Sbjct: 256 GIYHGQMANSAREESHRIFIRDEVHVMVATIAFGMGIDKPNIRHVIHYGCPKSLESYYQE 315

Query: 108 SGRCGRDGLASICWLYYTRSDFTKADFFCGESQGIQ 1
           SGRCGRDG+AS+CWLYY R DF KADF+CGE+ G Q
Sbjct: 316 SGRCGRDGIASVCWLYYNRGDFMKADFYCGEATGNQ 351


>ref|XP_002461224.1| hypothetical protein SORBIDRAFT_02g043160 [Sorghum bicolor]
           gi|241924601|gb|EER97745.1| hypothetical protein
           SORBIDRAFT_02g043160 [Sorghum bicolor]
          Length = 901

 Score =  177 bits (450), Expect = 6e-43
 Identities = 79/93 (84%), Positives = 86/93 (92%)
 Frame = -3

Query: 288 GIYHGQMSGKVREESHRSFIRDEVHVMVATVAFGMGIDKPNIRCVIHYGCPKSLESYYQE 109
           GIYHGQM  + REESHRSFIRDEV VMVAT+AFGMGIDKP++RCVIHYGCPKSLESYYQE
Sbjct: 256 GIYHGQMGSRAREESHRSFIRDEVLVMVATIAFGMGIDKPDVRCVIHYGCPKSLESYYQE 315

Query: 108 SGRCGRDGLASICWLYYTRSDFTKADFFCGESQ 10
           SGRCGRDGL SICWLYY RSDFTKADF+C E++
Sbjct: 316 SGRCGRDGLPSICWLYYQRSDFTKADFYCSEAK 348


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