BLASTX nr result

ID: Coptis21_contig00036083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036083
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinif...   188   4e-46
ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_003594589.1| MidA-like protein [Medicago truncatula] gi|3...   176   2e-42
ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799...   174   7e-42
gb|AAF40447.1|AC004809_5 F13M7.11 [Arabidopsis thaliana]              167   6e-40

>ref|XP_002263790.1| PREDICTED: protein midA homolog [Vitis vinifera]
          Length = 450

 Score =  188 bits (477), Expect = 4e-46
 Identities = 89/111 (80%), Positives = 100/111 (90%)
 Frame = +1

Query: 1   CIEIIDLDQDQSKTGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIA 180
           C+EIIDL++D +  G ++ SAAR IWSKVFPKPR+ WLPTGCLKLLEVLHGALPKMSLIA
Sbjct: 268 CVEIIDLEKDHNTQGRAI-SAARHIWSKVFPKPRRCWLPTGCLKLLEVLHGALPKMSLIA 326

Query: 181 SDFNYLPDVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLL 333
           SDF+YLPDVRIPG+RAPLVSTKKDG S+D  SYLD KGD+DIFFPTDFWLL
Sbjct: 327 SDFSYLPDVRIPGERAPLVSTKKDGSSSDHSSYLDAKGDADIFFPTDFWLL 377


>ref|XP_002298698.1| predicted protein [Populus trichocarpa] gi|222845956|gb|EEE83503.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/111 (73%), Positives = 96/111 (86%)
 Frame = +1

Query: 1   CIEIIDLDQDQSKTGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIA 180
           C+EI++LD++QS      VS A+S+WSKVFPKPR+ WLPTGCLKLL+VLH  LP+MSLIA
Sbjct: 255 CVEIVELDKNQS------VSIAKSVWSKVFPKPRRCWLPTGCLKLLDVLHEVLPRMSLIA 308

Query: 181 SDFNYLPDVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLL 333
           SDF+YLPDV IPG+RAPLVSTKKDG+S D  SYLD KGD+DIFFPTDFWLL
Sbjct: 309 SDFSYLPDVSIPGERAPLVSTKKDGRSLDYNSYLDTKGDADIFFPTDFWLL 359


>ref|XP_003594589.1| MidA-like protein [Medicago truncatula] gi|355483637|gb|AES64840.1|
           MidA-like protein [Medicago truncatula]
          Length = 442

 Score =  176 bits (445), Expect = 2e-42
 Identities = 81/111 (72%), Positives = 97/111 (87%)
 Frame = +1

Query: 1   CIEIIDLDQDQSKTGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIA 180
           C+EI+DLD+ ++ T SS  S  +SIWSKV+PKPR+ WLPTGCLKLL+VLH  LPKMSLIA
Sbjct: 260 CVEIMDLDKTKT-TQSSAASILKSIWSKVYPKPRRCWLPTGCLKLLDVLHEVLPKMSLIA 318

Query: 181 SDFNYLPDVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLL 333
           SDF+YLPDV+IPG+RAPLVSTKKDG+STD + Y+  KGD+DIFFPTDFWLL
Sbjct: 319 SDFSYLPDVKIPGERAPLVSTKKDGRSTDYQDYMQAKGDADIFFPTDFWLL 369


>ref|XP_003547338.1| PREDICTED: uncharacterized protein LOC100799456 [Glycine max]
          Length = 441

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/111 (72%), Positives = 96/111 (86%)
 Frame = +1

Query: 1   CIEIIDLDQDQSKTGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIA 180
           C+EI+DLD+ ++ T S+  S  +SIWSKV+PKPR+ WLPTGCLKLLEVLH  LPKMSLIA
Sbjct: 259 CVEIMDLDKTKT-TQSTAASTMKSIWSKVYPKPRRCWLPTGCLKLLEVLHEVLPKMSLIA 317

Query: 181 SDFNYLPDVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLL 333
           SDF+YLPDV+IPG+RAPLVSTKKDG S D  SY++ KGD+DIFFPTDFWLL
Sbjct: 318 SDFSYLPDVKIPGERAPLVSTKKDGSSLDYDSYMEAKGDADIFFPTDFWLL 368


>gb|AAF40447.1|AC004809_5 F13M7.11 [Arabidopsis thaliana]
          Length = 479

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/111 (71%), Positives = 92/111 (82%)
 Frame = +1

Query: 1   CIEIIDLDQDQSKTGSSVVSAARSIWSKVFPKPRKSWLPTGCLKLLEVLHGALPKMSLIA 180
           CIEI++ + D        VS  + IWSK+FPKPR+SWLPTGCLKLLEVLH  LPKMSLIA
Sbjct: 302 CIEIVEHEDDP-------VSKPKEIWSKLFPKPRRSWLPTGCLKLLEVLHAKLPKMSLIA 354

Query: 181 SDFNYLPDVRIPGDRAPLVSTKKDGKSTDLRSYLDVKGDSDIFFPTDFWLL 333
           SDF++LPDV++PG+RAPLVSTKKDG S+D  SYLD KGD+DIFFPTDFWLL
Sbjct: 355 SDFSFLPDVKVPGERAPLVSTKKDGCSSDYSSYLDAKGDADIFFPTDFWLL 405


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