BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036079
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66469.1| hypothetical protein VITISV_016566 [Vitis vinifera]   419   e-115
ref|XP_004158024.1| PREDICTED: NAD(P)H dehydrogenase B3, mitocho...   410   e-112
ref|XP_004146581.1| PREDICTED: NAD(P)H dehydrogenase B3, mitocho...   410   e-112
ref|XP_002524685.1| NADH dehydrogenase, putative [Ricinus commun...   408   e-111
ref|XP_003608247.1| External NADH-ubiquinone oxidoreductase [Med...   407   e-111

>emb|CAN66469.1| hypothetical protein VITISV_016566 [Vitis vinifera]
          Length = 618

 Score =  419 bits (1077), Expect = e-115
 Identities = 203/263 (77%), Positives = 223/263 (84%)
 Frame = +3

Query: 3    SIPYGMIVWSTGIGTRPVILEFMKQVGQVNRRALATDEWLRVDGSDSIYALGDCASINQR 182
            SIPYGM VWSTGIGTRPVI++FMKQ+GQ NRRALATDEWLRV+G DSIYALGDCA+INQR
Sbjct: 356  SIPYGMAVWSTGIGTRPVIMDFMKQIGQTNRRALATDEWLRVEGRDSIYALGDCATINQR 415

Query: 183  KVMXXXXXXXXXXXXXXSGTLTVKELQDVVNDICERYPQVQLYMKNKSMKNIVQLLEESK 362
            KVM              SGTLTVKE Q+ ++DICERYPQV+LY+KNK M +IV LL++SK
Sbjct: 416  KVMEDISAIFSKADNDNSGTLTVKEFQEAIDDICERYPQVELYLKNKQMHDIVDLLKDSK 475

Query: 363  GDNEKESKELDIERFKSALSAVDSKMKFLPATAQVAAQQGQYLAKCFNRMKECEQTPEGP 542
            GD  KES ELDIE FKSALS VDS+MK LPATAQVAAQQG YLA CFNRM+ECEQ PEGP
Sbjct: 476  GDVAKESIELDIEGFKSALSQVDSQMKNLPATAQVAAQQGAYLASCFNRMEECEQNPEGP 535

Query: 543  LRMRKDGRHRFHPFRYRHLGQFAPLGGEQTAFQLPGDHVSIGYSSQWLWYSVYASKQVSW 722
            LR R  GRHRFHPFRY+H GQFAPLGGEQTA QLPGD VSIG+SSQWLWYSVYASK VSW
Sbjct: 536  LRFRGSGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKLVSW 595

Query: 723  RNRMLVVSDWTRRFIYGRDSSRI 791
            R R LV+SDWTRRF++GRDSSRI
Sbjct: 596  RTRALVISDWTRRFVFGRDSSRI 618


>ref|XP_004158024.1| PREDICTED: NAD(P)H dehydrogenase B3, mitochondrial-like [Cucumis
            sativus]
          Length = 584

 Score =  410 bits (1053), Expect = e-112
 Identities = 200/263 (76%), Positives = 221/263 (84%)
 Frame = +3

Query: 3    SIPYGMIVWSTGIGTRPVILEFMKQVGQVNRRALATDEWLRVDGSDSIYALGDCASINQR 182
            S+PYGM VWSTGIGTRP+I +FM Q+GQ NRRALATDEWLRV+G D++YALGDCA+INQR
Sbjct: 322  SMPYGMTVWSTGIGTRPIIKDFMTQIGQANRRALATDEWLRVEGCDNVYALGDCATINQR 381

Query: 183  KVMXXXXXXXXXXXXXXSGTLTVKELQDVVNDICERYPQVQLYMKNKSMKNIVQLLEESK 362
            KVM              SGTLTVKE Q+V++DICERYPQV+LY+KNK M NIV LL+ SK
Sbjct: 382  KVMEDISAIFSKADKDNSGTLTVKEFQEVIDDICERYPQVELYLKNKQMHNIVDLLKGSK 441

Query: 363  GDNEKESKELDIERFKSALSAVDSKMKFLPATAQVAAQQGQYLAKCFNRMKECEQTPEGP 542
            GD  KES ELDIE FKSALS VDS+MK LPATAQVAAQQG YLA CFNRM+ECE+ PEGP
Sbjct: 442  GDVAKESIELDIEEFKSALSQVDSQMKNLPATAQVAAQQGAYLAHCFNRMEECEKYPEGP 501

Query: 543  LRMRKDGRHRFHPFRYRHLGQFAPLGGEQTAFQLPGDHVSIGYSSQWLWYSVYASKQVSW 722
            LR R  GRHRF  FRY+HLGQFAPLGGEQTA QLPGD VSIG+SSQWLWYSVYASKQVSW
Sbjct: 502  LRFRGSGRHRFRAFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSW 561

Query: 723  RNRMLVVSDWTRRFIYGRDSSRI 791
            R R LVV+DWTRRFI+GRDSSRI
Sbjct: 562  RTRALVVTDWTRRFIFGRDSSRI 584


>ref|XP_004146581.1| PREDICTED: NAD(P)H dehydrogenase B3, mitochondrial-like [Cucumis
            sativus]
          Length = 584

 Score =  410 bits (1053), Expect = e-112
 Identities = 200/263 (76%), Positives = 221/263 (84%)
 Frame = +3

Query: 3    SIPYGMIVWSTGIGTRPVILEFMKQVGQVNRRALATDEWLRVDGSDSIYALGDCASINQR 182
            S+PYGM VWSTGIGTRP+I +FM Q+GQ NRRALATDEWLRV+G D++YALGDCA+INQR
Sbjct: 322  SMPYGMTVWSTGIGTRPIIKDFMTQIGQANRRALATDEWLRVEGCDNVYALGDCATINQR 381

Query: 183  KVMXXXXXXXXXXXXXXSGTLTVKELQDVVNDICERYPQVQLYMKNKSMKNIVQLLEESK 362
            KVM              SGTLTVKE Q+V++DICERYPQV+LY+KNK M NIV LL+ SK
Sbjct: 382  KVMEDISAIFSKADKDNSGTLTVKEFQEVIDDICERYPQVELYLKNKQMHNIVDLLKGSK 441

Query: 363  GDNEKESKELDIERFKSALSAVDSKMKFLPATAQVAAQQGQYLAKCFNRMKECEQTPEGP 542
            GD  KES ELDIE FKSALS VDS+MK LPATAQVAAQQG YLA CFNRM+ECE+ PEGP
Sbjct: 442  GDVAKESIELDIEEFKSALSQVDSQMKNLPATAQVAAQQGAYLAHCFNRMEECEKYPEGP 501

Query: 543  LRMRKDGRHRFHPFRYRHLGQFAPLGGEQTAFQLPGDHVSIGYSSQWLWYSVYASKQVSW 722
            LR R  GRHRF  FRY+HLGQFAPLGGEQTA QLPGD VSIG+SSQWLWYSVYASKQVSW
Sbjct: 502  LRFRGSGRHRFRAFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSW 561

Query: 723  RNRMLVVSDWTRRFIYGRDSSRI 791
            R R LVV+DWTRRFI+GRDSSRI
Sbjct: 562  RTRALVVTDWTRRFIFGRDSSRI 584


>ref|XP_002524685.1| NADH dehydrogenase, putative [Ricinus communis]
            gi|223536046|gb|EEF37704.1| NADH dehydrogenase, putative
            [Ricinus communis]
          Length = 580

 Score =  408 bits (1048), Expect = e-111
 Identities = 195/263 (74%), Positives = 222/263 (84%)
 Frame = +3

Query: 3    SIPYGMIVWSTGIGTRPVILEFMKQVGQVNRRALATDEWLRVDGSDSIYALGDCASINQR 182
            SIPYGM+VWSTGIGT PVI +FM QVGQ NRRALATDEWLRV+G + +YALGDCA++NQR
Sbjct: 318  SIPYGMVVWSTGIGTHPVIRDFMGQVGQTNRRALATDEWLRVEGCNDVYALGDCATVNQR 377

Query: 183  KVMXXXXXXXXXXXXXXSGTLTVKELQDVVNDICERYPQVQLYMKNKSMKNIVQLLEESK 362
            KVM              SGTLT KE Q+V+NDICERYPQV+LY+KNK M+NIV LL+E K
Sbjct: 378  KVMEDISAIFKKADKDNSGTLTAKEFQEVINDICERYPQVELYLKNKKMRNIVDLLKEDK 437

Query: 363  GDNEKESKELDIERFKSALSAVDSKMKFLPATAQVAAQQGQYLAKCFNRMKECEQTPEGP 542
            GD  KES EL+IE FK+A+S VDS+MK+LPATAQVA+QQG YLA CFNRM+E E+ PEGP
Sbjct: 438  GDVAKESIELNIEEFKTAVSEVDSQMKYLPATAQVASQQGTYLATCFNRMEEAEKNPEGP 497

Query: 543  LRMRKDGRHRFHPFRYRHLGQFAPLGGEQTAFQLPGDHVSIGYSSQWLWYSVYASKQVSW 722
            LR R +GRHRF PFRY+HLGQFAPLGGEQTA QLPGD VSIG+S+QWLWYSVYASKQVSW
Sbjct: 498  LRFRGEGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSTQWLWYSVYASKQVSW 557

Query: 723  RNRMLVVSDWTRRFIYGRDSSRI 791
            R R LVV+DWTRRFI+GRDSSRI
Sbjct: 558  RTRALVVTDWTRRFIFGRDSSRI 580


>ref|XP_003608247.1| External NADH-ubiquinone oxidoreductase [Medicago truncatula]
            gi|87240748|gb|ABD32606.1| FAD-dependent pyridine
            nucleotide-disulphide oxidoreductase; Calcium-binding
            EF-hand [Medicago truncatula] gi|355509302|gb|AES90444.1|
            External NADH-ubiquinone oxidoreductase [Medicago
            truncatula]
          Length = 578

 Score =  407 bits (1047), Expect = e-111
 Identities = 195/263 (74%), Positives = 223/263 (84%)
 Frame = +3

Query: 3    SIPYGMIVWSTGIGTRPVILEFMKQVGQVNRRALATDEWLRVDGSDSIYALGDCASINQR 182
            +IPYGM VWSTGIGTRP I +FM Q+GQVNRRA+ATDEWLRV+G+D++YALGDCA+INQR
Sbjct: 316  TIPYGMAVWSTGIGTRPFIKDFMTQIGQVNRRAIATDEWLRVEGTDNVYALGDCATINQR 375

Query: 183  KVMXXXXXXXXXXXXXXSGTLTVKELQDVVNDICERYPQVQLYMKNKSMKNIVQLLEESK 362
            KVM              SGTLT+KE Q+V+NDICERYPQV+LY+KNK M  I  LL+ESK
Sbjct: 376  KVMEDIAAIFKKTDADNSGTLTLKEFQEVMNDICERYPQVELYLKNKQMHGIADLLKESK 435

Query: 363  GDNEKESKELDIERFKSALSAVDSKMKFLPATAQVAAQQGQYLAKCFNRMKECEQTPEGP 542
            GD +KES EL+IE  K+A S VDS+MKFLPATAQVA+QQG YLAKCFNRM+ECE+ PEGP
Sbjct: 436  GDVKKESIELNIEELKTAFSNVDSEMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGP 495

Query: 543  LRMRKDGRHRFHPFRYRHLGQFAPLGGEQTAFQLPGDHVSIGYSSQWLWYSVYASKQVSW 722
            +R R +GRHRF PFRY+HLGQFAPLGGEQTA QLPGD VSIG+SSQWLWYSVYASKQVSW
Sbjct: 496  IRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSW 555

Query: 723  RNRMLVVSDWTRRFIYGRDSSRI 791
            R R LVVSDW RRFI+GRDSS+I
Sbjct: 556  RTRALVVSDWMRRFIFGRDSSQI 578