BLASTX nr result

ID: Coptis21_contig00036077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036077
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40379.1| unknown [Medicago truncatula]                          125   3e-27
ref|XP_003603935.1| Transcription factor BEE [Medicago truncatul...   125   3e-27
ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like ...   124   6e-27
ref|XP_002512912.1| conserved hypothetical protein [Ricinus comm...   123   2e-26
ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like ...   120   1e-25

>gb|AFK40379.1| unknown [Medicago truncatula]
          Length = 397

 Score =  125 bits (315), Expect = 3e-27
 Identities = 79/143 (55%), Positives = 95/143 (66%), Gaps = 23/143 (16%)
 Frame = +1

Query: 130 SISRRFSCPPVVSDDDQVVTE-AGEMR----KKRKADNAH-NSKAK--------EINDKR 267
           SISR FSCPP++ D   + +  AG+ +    KKRKA+ +H NSK K        E  DKR
Sbjct: 85  SISRTFSCPPLLPDPKLIHSSIAGKDKDNSSKKRKAEKSHHNSKLKVVVGEIEIENKDKR 144

Query: 268 IK-----GEAEEVVLKEKRETCA----DVSKENSKVSEVQKQEFIHVRARRGQATDSHSL 420
           IK     GE++       ++ C       SKENSKVS+VQK ++IHVRARRGQATDSHSL
Sbjct: 145 IKIGSEDGESKITGNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSL 204

Query: 421 VERVRREKISERMRYLQDLVPGC 489
            ERVRREKISERM+YLQDLVPGC
Sbjct: 205 AERVRREKISERMKYLQDLVPGC 227


>ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
           gi|355492983|gb|AES74186.1| Transcription factor BEE
           [Medicago truncatula]
          Length = 398

 Score =  125 bits (315), Expect = 3e-27
 Identities = 79/143 (55%), Positives = 95/143 (66%), Gaps = 23/143 (16%)
 Frame = +1

Query: 130 SISRRFSCPPVVSDDDQVVTE-AGEMR----KKRKADNAH-NSKAK--------EINDKR 267
           SISR FSCPP++ D   + +  AG+ +    KKRKA+ +H NSK K        E  DKR
Sbjct: 85  SISRTFSCPPLLPDPKLIHSSIAGKDKDNSSKKRKAEKSHHNSKLKVVVGEIEIENKDKR 144

Query: 268 IK-----GEAEEVVLKEKRETCA----DVSKENSKVSEVQKQEFIHVRARRGQATDSHSL 420
           IK     GE++       ++ C       SKENSKVS+VQK ++IHVRARRGQATDSHSL
Sbjct: 145 IKIGSEDGESKITGNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSL 204

Query: 421 VERVRREKISERMRYLQDLVPGC 489
            ERVRREKISERM+YLQDLVPGC
Sbjct: 205 AERVRREKISERMKYLQDLVPGC 227


>ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
          Length = 398

 Score =  124 bits (312), Expect = 6e-27
 Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 19/139 (13%)
 Frame = +1

Query: 130 SISRRFSCPPVVSDDDQVVTEAG---EMRKKRKADNAHNSKA---KEINDKRIKGEAEEV 291
           SISR FSCPP + D +   T++    +  KKRK D  HN K     E  DKRIK  A++ 
Sbjct: 94  SISRTFSCPPALVDPEPKPTDSSIGKDSFKKRKTDKPHNPKVVAENENKDKRIKVGADDG 153

Query: 292 VLK-----------EKRETCADVS--KENSKVSEVQKQEFIHVRARRGQATDSHSLVERV 432
             K             +ETC D S  K+NSK SE  K ++IHVRARRGQATDSHSL ERV
Sbjct: 154 ESKITKCNTINTNTNNKETCTDTSNSKQNSKASE--KPDYIHVRARRGQATDSHSLAERV 211

Query: 433 RREKISERMRYLQDLVPGC 489
           RREKISERM YLQDLVPGC
Sbjct: 212 RREKISERMNYLQDLVPGC 230


>ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
           gi|223547923|gb|EEF49415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 444

 Score =  123 bits (308), Expect = 2e-26
 Identities = 79/155 (50%), Positives = 95/155 (61%), Gaps = 35/155 (22%)
 Frame = +1

Query: 130 SISRRFSCPPVVSDD--------DQVVTE------AGEMRKKRKADNAHNSK---AKEIN 258
           +ISR  SCPP V+D         + VV+E        E  KKRK D   N+    A++ N
Sbjct: 116 AISRTSSCPPTVADAGPVLVKGRESVVSEKLTCGVGSESTKKRKVDKVQNNTKVVAEDDN 175

Query: 259 --DKRIK---GEAEEVVLKEK-------------RETCADVSKENSKVSEVQKQEFIHVR 384
             DKRIK    E E  ++ EK             +E  A+ SK+NSKV+EVQK ++IHVR
Sbjct: 176 CRDKRIKVCAEEGESKMITEKNNNNKSSSSKNSNKENSAETSKDNSKVTEVQKPDYIHVR 235

Query: 385 ARRGQATDSHSLVERVRREKISERMRYLQDLVPGC 489
           ARRGQATDSHSL ERVRREKISERM+YLQDLVPGC
Sbjct: 236 ARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 270


>ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
          Length = 456

 Score =  120 bits (301), Expect = 1e-25
 Identities = 77/157 (49%), Positives = 91/157 (57%), Gaps = 37/157 (23%)
 Frame = +1

Query: 130 SISRRFSCPPVVSDD--DQVVTEAG-EMRKKRKADNAHNSKA----------------KE 252
           S+SR  SC PVV+    +++ + AG E  KKRKA+ AHN+                    
Sbjct: 129 SLSRTSSCLPVVAPTVAEKMGSMAGRESFKKRKAEKAHNTTTTANTNNNKVTVEEDENNN 188

Query: 253 INDKRIKGEAEEVVLK------------------EKRETCADVSKENSKVSEVQKQEFIH 378
             +KRIK  +E  + K                    RET AD SKENSK SEVQK ++IH
Sbjct: 189 SKEKRIKTSSEGELSKTTDQNGTKNNSTITTTTNNNRETSADTSKENSKASEVQKPDYIH 248

Query: 379 VRARRGQATDSHSLVERVRREKISERMRYLQDLVPGC 489
           VRARRGQATDSHSL ER RREKISERM+YLQDLVPGC
Sbjct: 249 VRARRGQATDSHSLAERARREKISERMKYLQDLVPGC 285


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