BLASTX nr result

ID: Coptis21_contig00036073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036073
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275613.1| PREDICTED: expansin-A7 [Vitis vinifera] gi|2...    90   2e-16
ref|XP_004144001.1| PREDICTED: expansin-A7-like [Cucumis sativus...    88   6e-16
ref|XP_003550883.1| PREDICTED: putative expansin-A30-like [Glyci...    88   6e-16
gb|AFK49001.1| unknown [Medicago truncatula]                           87   1e-15
ref|XP_003525550.1| PREDICTED: LOW QUALITY PROTEIN: putative exp...    87   2e-15

>ref|XP_002275613.1| PREDICTED: expansin-A7 [Vitis vinifera]
           gi|297742626|emb|CBI34775.3| unnamed protein product
           [Vitis vinifera]
          Length = 264

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = +1

Query: 85  LIWMIIMKPTAAVPPLNRFQPSAWYQAHATFYGDESASSTMGGACGYGNLLSNGYGTDTA 264
           L++ II K T AV P+  F+PS W  AHATFYGD++AS TMGGACGYGNL  NGYGTDT 
Sbjct: 17  LVFTIIAKSTLAVAPV--FRPSRWALAHATFYGDDTASETMGGACGYGNLFLNGYGTDTV 74

Query: 265 ALST 276
           ALS+
Sbjct: 75  ALSS 78


>ref|XP_004144001.1| PREDICTED: expansin-A7-like [Cucumis sativus]
           gi|449525541|ref|XP_004169775.1| PREDICTED:
           expansin-A7-like [Cucumis sativus]
          Length = 260

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/64 (67%), Positives = 48/64 (75%)
 Frame = +1

Query: 85  LIWMIIMKPTAAVPPLNRFQPSAWYQAHATFYGDESASSTMGGACGYGNLLSNGYGTDTA 264
           L+  I M+ T AV     FQPS W  AHATFYGDE+AS TMGGACGYGNL +NGYGTDT 
Sbjct: 16  LVLAIFMRSTLAV-----FQPSPWKLAHATFYGDETASETMGGACGYGNLFTNGYGTDTV 70

Query: 265 ALST 276
           ALS+
Sbjct: 71  ALSS 74


>ref|XP_003550883.1| PREDICTED: putative expansin-A30-like [Glycine max]
          Length = 265

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/64 (68%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
 Frame = +1

Query: 91  WMIIMKPTAAVPPL--NRFQPSAWYQAHATFYGDESASSTMGGACGYGNLLSNGYGTDTA 264
           WM I+      PP+    FQPS W  AHATFYGDESAS+TMGGACGYGNLL NGYG DTA
Sbjct: 18  WMFIL--IIGKPPIVAGTFQPSQWTLAHATFYGDESASATMGGACGYGNLLINGYGKDTA 75

Query: 265 ALST 276
           ALS+
Sbjct: 76  ALSS 79


>gb|AFK49001.1| unknown [Medicago truncatula]
          Length = 262

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/64 (67%), Positives = 48/64 (75%)
 Frame = +1

Query: 85  LIWMIIMKPTAAVPPLNRFQPSAWYQAHATFYGDESASSTMGGACGYGNLLSNGYGTDTA 264
           L+  II KP      +  FQPS W  AHATFYGDE+AS+TMGGACGYGNL  NGYGTDTA
Sbjct: 16  LMLTIIGKPALV---MGTFQPSPWTLAHATFYGDETASATMGGACGYGNLFVNGYGTDTA 72

Query: 265 ALST 276
           ALS+
Sbjct: 73  ALSS 76


>ref|XP_003525550.1| PREDICTED: LOW QUALITY PROTEIN: putative expansin-A30-like [Glycine
           max]
          Length = 264

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/64 (65%), Positives = 49/64 (76%)
 Frame = +1

Query: 85  LIWMIIMKPTAAVPPLNRFQPSAWYQAHATFYGDESASSTMGGACGYGNLLSNGYGTDTA 264
           ++++II KP   V     FQPS W  +HATFYGDESAS+TMGGACGYGNL  NGYG DTA
Sbjct: 18  IMFIIIGKPAIVV---GTFQPSQWTLSHATFYGDESASATMGGACGYGNLFINGYGKDTA 74

Query: 265 ALST 276
           ALS+
Sbjct: 75  ALSS 78


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