BLASTX nr result

ID: Coptis21_contig00036070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036070
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU55660.1| CBF1-like protein [Parthenocissus inserta]              95   7e-18
gb|ADY68770.1| DREB1/CBF transcription factor [Adonis amurensis]       94   9e-18
gb|ABU55668.1| CBF1-like protein [Cissus verticillata] gi|156186...    94   9e-18
gb|ABU55663.1| CBF1-like protein [Ampelopsis cordata]                  94   9e-18
gb|ABC79626.1| CBF1 [Populus tomentosa]                                94   1e-17

>gb|ABU55660.1| CBF1-like protein [Parthenocissus inserta]
          Length = 184

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 62/144 (43%), Positives = 74/144 (51%), Gaps = 17/144 (11%)
 Frame = -2

Query: 395 PNKKSRIWLGTHSTPEMXXXXXXXXXXALRGKSAPLNFPDSAWRLPCPMSSSAKDIQSAA 216
           P KKSRIWLGT  TPEM          ALRG  A LNFPDSAWRLP P SSSA+DIQ AA
Sbjct: 41  PLKKSRIWLGTFPTPEMAARAHDVAALALRGHFASLNFPDSAWRLPRPKSSSAEDIQIAA 100

Query: 215 LKAAQSFGP------EXXXXXXXXXXXXXXXXXXXXXTYVQLPRIRSVQKLPEYS----- 69
           L+A +SF P                              V+ P+++S +K+ E S     
Sbjct: 101 LEATKSFNPTAPSSSSLASALDSMSGVPGSKKVLETSPSVESPKLKSQRKVLEVSSVDTK 160

Query: 68  ------RTFWDEEAMFNLPILMNS 15
                   F DEEA+FN+P L+NS
Sbjct: 161 VADGSMTVFMDEEAVFNMPGLINS 184


>gb|ADY68770.1| DREB1/CBF transcription factor [Adonis amurensis]
          Length = 206

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 58/129 (44%), Positives = 69/129 (53%)
 Frame = -2

Query: 389 KKSRIWLGTHSTPEMXXXXXXXXXXALRGKSAPLNFPDSAWRLPCPMSSSAKDIQSAALK 210
           K S IWLGT  TP M          ALRGKSAPLNF DSAW LP P SSSA+DI+ AA +
Sbjct: 69  KNSSIWLGTFPTPGMAARAYDVAALALRGKSAPLNFVDSAWLLPRPKSSSAQDIKLAASE 128

Query: 209 AAQSFGPEXXXXXXXXXXXXXXXXXXXXXTYVQLPRIRSVQKLPEYSRTFWDEEAMFNLP 30
           AAQ+F P                               +++   E S  FWDEEAMFN+P
Sbjct: 129 AAQAFAPTATSSSSSSSP-------------------MNLRVPVEPSSMFWDEEAMFNMP 169

Query: 29  ILMNSMAEG 3
            L+++MAEG
Sbjct: 170 SLLDNMAEG 178


>gb|ABU55668.1| CBF1-like protein [Cissus verticillata] gi|156186827|gb|ABU55669.1|
           CBF1-like protein [Leea guineensis]
          Length = 184

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 62/144 (43%), Positives = 74/144 (51%), Gaps = 17/144 (11%)
 Frame = -2

Query: 395 PNKKSRIWLGTHSTPEMXXXXXXXXXXALRGKSAPLNFPDSAWRLPCPMSSSAKDIQSAA 216
           P KKSRIWLGT  TPEM          ALRG  A LNFPDSAWRLP P SSSA+DIQ AA
Sbjct: 41  PLKKSRIWLGTFPTPEMAARAHDVAALALRGHFASLNFPDSAWRLPRPKSSSAEDIQIAA 100

Query: 215 LKAAQSFGP------EXXXXXXXXXXXXXXXXXXXXXTYVQLPRIRSVQKLPEYS----- 69
           L+A +SF P                              V+ P+++S +K+ E S     
Sbjct: 101 LEATKSFNPTAPSSSSLASALDSMSGVPGSKKVLETSPSVEPPKLKSQRKVLEVSSVDTK 160

Query: 68  ------RTFWDEEAMFNLPILMNS 15
                   F DEEA+FN+P L+NS
Sbjct: 161 VADGSVTVFMDEEAVFNMPGLINS 184


>gb|ABU55663.1| CBF1-like protein [Ampelopsis cordata]
          Length = 184

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 62/144 (43%), Positives = 74/144 (51%), Gaps = 17/144 (11%)
 Frame = -2

Query: 395 PNKKSRIWLGTHSTPEMXXXXXXXXXXALRGKSAPLNFPDSAWRLPCPMSSSAKDIQSAA 216
           P KKSRIWLGT  TPEM          ALRG  A LNFPDSAWRLP P SSSA+DIQ AA
Sbjct: 41  PLKKSRIWLGTFPTPEMAARAHDVAALALRGHFASLNFPDSAWRLPRPKSSSAEDIQIAA 100

Query: 215 LKAAQSFGP------EXXXXXXXXXXXXXXXXXXXXXTYVQLPRIRSVQKLPEYS----- 69
           L+A +SF P                              V+ P+++S +K+ E S     
Sbjct: 101 LEATKSFNPTAPSSSSLASALDSMSGVPGSKKVLETSPSVEPPKLKSQRKVLEVSSVDTK 160

Query: 68  ------RTFWDEEAMFNLPILMNS 15
                   F DEEA+FN+P L+NS
Sbjct: 161 DADGSVTVFMDEEAVFNMPGLINS 184


>gb|ABC79626.1| CBF1 [Populus tomentosa]
          Length = 231

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 58/131 (44%), Positives = 71/131 (54%)
 Frame = -2

Query: 395 PNKKSRIWLGTHSTPEMXXXXXXXXXXALRGKSAPLNFPDSAWRLPCPMSSSAKDIQSAA 216
           PNKKSRIWLGT+ TPEM          A RGKSA LNF DSAWRLP P+S+ AKDI+ AA
Sbjct: 81  PNKKSRIWLGTYPTPEMAARAHDVAALAFRGKSACLNFADSAWRLPAPISNEAKDIRRAA 140

Query: 215 LKAAQSFGPEXXXXXXXXXXXXXXXXXXXXXTYVQLPRIRSVQKLPEYSRTFWDEEAMFN 36
            +AA+ F                          V       ++ LP  + ++ DEEA FN
Sbjct: 141 SEAAELFRTSDLGGQVMEDHTTENRGE------VCSSTNDDIRDLPSENVSYIDEEAEFN 194

Query: 35  LPILMNSMAEG 3
           LP L+ +MAEG
Sbjct: 195 LPGLLANMAEG 205


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