BLASTX nr result

ID: Coptis21_contig00036054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036054
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24140.3| unnamed protein product [Vitis vinifera]              157   8e-37
ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [...   157   8e-37
ref|XP_002312226.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258...   150   1e-34

>emb|CBI24140.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/102 (72%), Positives = 87/102 (85%)
 Frame = -3

Query: 308 DLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 129
           +LKRGSFS+QEE+ IID HRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLI+QGLDP
Sbjct: 63  ELKRGSFSAQEEQSIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDP 122

Query: 128 KTHNLMPSHQIHNNIKNACNVNQFYQQPSSVFSINTQIRSDA 3
           KTHNL+ SHQ + + K  C++ Q +QQP  VF++N Q+  DA
Sbjct: 123 KTHNLISSHQRNTSNKVVCSLPQPHQQPFPVFTVNQQMTDDA 164


>ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [Vitis vinifera]
           gi|147854236|emb|CAN83435.1| hypothetical protein
           VITISV_010137 [Vitis vinifera]
          Length = 337

 Score =  157 bits (397), Expect = 8e-37
 Identities = 74/102 (72%), Positives = 87/102 (85%)
 Frame = -3

Query: 308 DLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 129
           +LKRGSFS+QEE+ IID HRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLI+QGLDP
Sbjct: 63  ELKRGSFSAQEEQSIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLISQGLDP 122

Query: 128 KTHNLMPSHQIHNNIKNACNVNQFYQQPSSVFSINTQIRSDA 3
           KTHNL+ SHQ + + K  C++ Q +QQP  VF++N Q+  DA
Sbjct: 123 KTHNLISSHQRNTSNKVVCSLPQPHQQPFPVFTVNQQMTDDA 164


>ref|XP_002312226.1| predicted protein [Populus trichocarpa] gi|222852046|gb|EEE89593.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/99 (73%), Positives = 89/99 (89%)
 Frame = -3

Query: 308 DLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 129
           +LKRGSFS++EE+IIID HRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKL+AQGLDP
Sbjct: 63  ELKRGSFSAEEEQIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLMAQGLDP 122

Query: 128 KTHNLMPSHQIHNNIKNACNVNQFYQQPSSVFSINTQIR 12
           KTHNL+PSHQ   N K ACN++Q  QQP S+ +++++++
Sbjct: 123 KTHNLIPSHQRAAN-KVACNISQSNQQPFSIITLDSKMK 160


>ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|222841147|gb|EEE78694.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/101 (69%), Positives = 86/101 (85%), Gaps = 3/101 (2%)
 Frame = -3

Query: 308 DLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 129
           DLKRGSF++QEE II++ HR+LGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP
Sbjct: 77  DLKRGSFTAQEESIIVEIHRMLGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 136

Query: 128 KTHNLMPSHQIHNNIKNACNVNQF---YQQPSSVFSINTQI 15
           KTHNL+ ++  HNN  NAC +  +   +QQ +S F++++QI
Sbjct: 137 KTHNLLSNNYKHNNNNNACELISYQYSHQQTTSTFTVDSQI 177


>ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258147 [Vitis vinifera]
           gi|297738187|emb|CBI27388.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score =  150 bits (378), Expect = 1e-34
 Identities = 76/106 (71%), Positives = 89/106 (83%), Gaps = 4/106 (3%)
 Frame = -3

Query: 308 DLKRGSFSSQEERIIIDCHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 129
           DLKRGSFS+QEER IID HRI+GN+WAQIAK+LPGRTDNEVKNFWNSCIKKKLIAQGLDP
Sbjct: 63  DLKRGSFSAQEERTIIDVHRIVGNKWAQIAKYLPGRTDNEVKNFWNSCIKKKLIAQGLDP 122

Query: 128 KTHN-LMPSHQIHNNIK--NACNVNQFYQQPSS-VFSINTQIRSDA 3
            TH+ L+P  QI+NN    NAC ++  +QQP++ VFS NTQ+  DA
Sbjct: 123 NTHHLLLPIDQINNNNNNTNACTLSHIHQQPTALVFSSNTQMIKDA 168


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