BLASTX nr result

ID: Coptis21_contig00036034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036034
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171963.1| PREDICTED: protein VAC14 homolog [Cucumis sa...    59   5e-07
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    57   2e-06
emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]    55   6e-06
emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]    55   6e-06

>ref|XP_004171963.1| PREDICTED: protein VAC14 homolog [Cucumis sativus]
          Length = 709

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
 Frame = -1

Query: 492 RLCRIIDKNQIVKRLSSKLGNGTRISFWEDKWCTNVPLGEAFNELNLISNIKVGSVHQHV 313
           R+ R++D        S  LGNG RI FW D W  N PL E F+ L  I+ +  GSV  H 
Sbjct: 410 RVWRLVDS-----LASFNLGNGLRIGFWTDPWVGNTPLKEQFSSLLRIALLPSGSVASH- 463

Query: 312 FMHGI--------QALEEREMQDVNSLLDILIWQMVGNEDDERTWR-D*VEKFSAKSLFE 160
           + H I        ++L++ E+ +  SLL +L  + V   DD R+W  +    FS KSL  
Sbjct: 464 WDHDISYWYLAFRRSLKDEEIVEFQSLLSLLSTEKVVTFDDFRSWSINSHGWFSVKSLSS 523

Query: 159 EL 154
            L
Sbjct: 524 HL 525


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 13/122 (10%)
 Frame = -1

Query: 477  IDKNQIVKRLSSKLGNGTRISFWEDKWCTNVPLGEAFNELNLISNIK---VGSVHQHVFM 307
            +D + +  R+S  +GNG R+SFW D+WC   PL ++F  +  +S  K   V  V   +  
Sbjct: 1553 MDWDLVGARISFSVGNGRRVSFWRDRWCGXAPLCDSFPSIYALSIEKEAWVADVWDPLVQ 1612

Query: 306  HG--------IQALEEREMQDVNSLLDILIW-QMVGNEDDERTWRD*VEK-FSAKSLFEE 157
             G         +AL + EM++    L  L   +++G+EDD+  W +     FSAKSL+  
Sbjct: 1613 GGRGGWNPCFSRALNDWEMEEAELFLGCLHGKRVIGDEDDKVVWTETKSGIFSAKSLYLA 1672

Query: 156  LD 151
            L+
Sbjct: 1673 LE 1674


>emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
          Length = 587

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
 Frame = -1

Query: 477 IDKNQIVKRLSSKLGNGTRISFWEDKWCTNVPLGEAFNELNLISNIK---VGSVHQHVFM 307
           +D + +  R+S  +GNG R+SFW D+WC + PL E+F  L  +S  K   V  V   +  
Sbjct: 292 MDWDLVGARISFSVGNGRRVSFWRDRWCGDAPLCESFPSLYALSIEKEAWVADVWDPLVQ 351

Query: 306 HGI--------QALEEREMQDVNSLLDILIWQMV-GNEDDERTWRD*VEK-FSAKSLFEE 157
            G         +AL   E+++    L  L  + V G+ DD+  W +     FSAKSL+  
Sbjct: 352 GGXGGXNPCFSRALNNWEVEEAELFLGCLHGKRVLGDVDDKAVWTETKSGIFSAKSLYLA 411

Query: 156 LD 151
           L+
Sbjct: 412 LE 413


>emb|CAN62743.1| hypothetical protein VITISV_033107 [Vitis vinifera]
          Length = 1168

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
 Frame = -1

Query: 456  KRLSSKLGNGTRISFWEDKWCTNVPLGEAFNELNLISNIKVGSVHQHVFMHGIQA----L 289
            + LS  +G G++I FW+D+WCT+ PL + FN L +++  +  S+ +    H  Q     +
Sbjct: 883  ENLSFLVGKGSKIKFWKDRWCTDTPLSQCFNHLFVLAVHRDASIEEMWDHHSGQGDWNLI 942

Query: 288  EEREMQD-----VNSLLDILIWQMVGNEDDERTWRD*VE-KFSAKSLFEELDK 148
             ER+  D     V  LL  L       EDD   WR   +  F  K  +  LDK
Sbjct: 943  FERDFNDWELDMVGDLLRTLRGHRPSLEDDSIKWRQGRKGSFRVKEAYSLLDK 995