BLASTX nr result

ID: Coptis21_contig00036031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036031
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64889.1| hypothetical protein VITISV_021080 [Vitis vinifera]   186   2e-45
ref|XP_002280802.1| PREDICTED: PGR5-like protein 1B, chloroplast...   184   5e-45
ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002533094.1| conserved hypothetical protein [Ricinus comm...   177   6e-43
ref|XP_002313431.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>emb|CAN64889.1| hypothetical protein VITISV_021080 [Vitis vinifera]
          Length = 1059

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/129 (72%), Positives = 104/129 (80%)
 Frame = -1

Query: 389  QGPSCIFVGPIETAKKESLEALYSQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKY 210
            +GPSCIFVGPIETA KE+LEALY QARDAYYSG+PLIVDDMFDRVELKLRWYGSKSV+KY
Sbjct: 820  EGPSCIFVGPIETASKETLEALYCQARDAYYSGEPLIVDDMFDRVELKLRWYGSKSVLKY 879

Query: 209  PRCSLRRQLTYADAEEDPSQVWALASVWMXXXXXXXXXXLVPVHYIVALAYQDALHSRLF 30
            PRCSLRR  TYADAEEDPSQV+ALAS+W+          LVP+ Y V  AYQDA +S L 
Sbjct: 880  PRCSLRRHYTYADAEEDPSQVFALASIWILFLAFGGSACLVPIIYTVGQAYQDAFNSGLS 939

Query: 29   SSGTETALE 3
             S   +AL+
Sbjct: 940  YSSQASALQ 948


>ref|XP_002280802.1| PREDICTED: PGR5-like protein 1B, chloroplastic [Vitis vinifera]
           gi|297746060|emb|CBI16116.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/129 (71%), Positives = 104/129 (80%)
 Frame = -1

Query: 389 QGPSCIFVGPIETAKKESLEALYSQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKY 210
           +GPSCIFVGPIETA KE+LEALY QARDAYYSG+PLIVDDMFDRVELKLRWYGSKSV+KY
Sbjct: 54  EGPSCIFVGPIETASKETLEALYCQARDAYYSGEPLIVDDMFDRVELKLRWYGSKSVLKY 113

Query: 209 PRCSLRRQLTYADAEEDPSQVWALASVWMXXXXXXXXXXLVPVHYIVALAYQDALHSRLF 30
           PRCSLR+  TYADAEEDPSQV+ALAS+W+          LVP+ Y V  AYQDA +S L 
Sbjct: 114 PRCSLRQHYTYADAEEDPSQVFALASIWILFLAFGGSACLVPIIYTVGQAYQDAFNSGLS 173

Query: 29  SSGTETALE 3
            S   +AL+
Sbjct: 174 YSSQASALQ 182


>ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|222847127|gb|EEE84674.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/121 (71%), Positives = 98/121 (80%)
 Frame = -1

Query: 401 SLADQGPSCIFVGPIETAKKESLEALYSQARDAYYSGKPLIVDDMFDRVELKLRWYGSKS 222
           +L+ +GPSCIFVGPIETA +++LEALY QARDAYYSGKPLIVDDMFDRVELKLRWYGSKS
Sbjct: 53  ALSPEGPSCIFVGPIETASQDTLEALYCQARDAYYSGKPLIVDDMFDRVELKLRWYGSKS 112

Query: 221 VVKYPRCSLRRQLTYADAEEDPSQVWALASVWMXXXXXXXXXXLVPVHYIVALAYQDALH 42
           VVKYPRCSLRRQ TY+DAEED SQ +ALAS+W+            P+ Y V LAYQDA  
Sbjct: 113 VVKYPRCSLRRQSTYSDAEEDISQAFALASIWVLFLTIGSSACAFPIIYTVGLAYQDAFG 172

Query: 41  S 39
           S
Sbjct: 173 S 173


>ref|XP_002533094.1| conserved hypothetical protein [Ricinus communis]
           gi|223527106|gb|EEF29286.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score =  177 bits (450), Expect = 6e-43
 Identities = 86/128 (67%), Positives = 105/128 (82%)
 Frame = -1

Query: 389 QGPSCIFVGPIETAKKESLEALYSQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKY 210
           +GPSCI+VGP+ETA KE+LEALY QARDAYYSG+PLIVDDMFDRVELKLRWYGSKSVVKY
Sbjct: 50  EGPSCIYVGPVETASKETLEALYRQARDAYYSGQPLIVDDMFDRVELKLRWYGSKSVVKY 109

Query: 209 PRCSLRRQLTYADAEEDPSQVWALASVWMXXXXXXXXXXLVPVHYIVALAYQDALHSRLF 30
           PRCS+RRQ TYADAE+D SQV+ALAS+W+          + P+ Y   LAYQDA+ S++ 
Sbjct: 110 PRCSIRRQSTYADAEDDISQVFALASIWIVFLTIGSSLCVGPIIYSFVLAYQDAISSKI- 168

Query: 29  SSGTETAL 6
           S G++ ++
Sbjct: 169 SQGSQASM 176


>ref|XP_002313431.1| predicted protein [Populus trichocarpa] gi|222849839|gb|EEE87386.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/132 (64%), Positives = 103/132 (78%)
 Frame = -1

Query: 401 SLADQGPSCIFVGPIETAKKESLEALYSQARDAYYSGKPLIVDDMFDRVELKLRWYGSKS 222
           +LA +GPSC+FVGPIETA +E+LEALY QARDAYYSGKPLI+DDMFDRVELKLR YGSK 
Sbjct: 51  ALAPEGPSCLFVGPIETASQETLEALYRQARDAYYSGKPLIIDDMFDRVELKLRCYGSKC 110

Query: 221 VVKYPRCSLRRQLTYADAEEDPSQVWALASVWMXXXXXXXXXXLVPVHYIVALAYQDALH 42
           VVKYPRCS+RRQ TY+DAE D SQ +ALAS+W+           +P+ Y + LAYQDA  
Sbjct: 111 VVKYPRCSIRRQSTYSDAEADISQAFALASIWILFLTVGCSACALPIIYTIGLAYQDAFG 170

Query: 41  SRLFSSGTETAL 6
           S + S G++T +
Sbjct: 171 S-VISHGSQTPI 181


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