BLASTX nr result

ID: Coptis21_contig00036013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036013
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526689.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
emb|CBI25412.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246...    69   3e-10
ref|XP_002882708.1| hypothetical protein ARALYDRAFT_478446 [Arab...    64   1e-08
emb|CBI18099.3| unnamed protein product [Vitis vinifera]               62   4e-08

>ref|XP_002526689.1| conserved hypothetical protein [Ricinus communis]
           gi|223533989|gb|EEF35711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 665

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
 Frame = -2

Query: 400 LDINPQAWTDDGSEKTKFPAQVRVRIRKQIKFLPEMKYKKVIQKNYIXXXXXXXXXXXRQ 221
           ++INP  WT DGS +T++PAQV++R+R Q   L E K+K +I  NY             Q
Sbjct: 82  MNINPYGWTTDGSRRTQYPAQVQIRVRLQCHPLSEEKFKPIIADNYYRYHHFWFELDHAQ 141

Query: 220 TSQLFSLFESSPA--------------TFRRPLQVSSPRTEGVKLISEE 116
           TS+L SLF SSP               T  +P+ +S  R EG K ++ E
Sbjct: 142 TSKLMSLFASSPVAPGTSAPENTAKWRTIYQPISLSERRDEGYKPLASE 190


>emb|CBI25412.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/80 (42%), Positives = 50/80 (62%)
 Frame = -2

Query: 400 LDINPQAWTDDGSEKTKFPAQVRVRIRKQIKFLPEMKYKKVIQKNYIXXXXXXXXXXXRQ 221
           ++INP  WT DGS+ T +PAQVR++IR Q + L E ++K +I KNY             Q
Sbjct: 98  MNINPYGWTPDGSQLTPYPAQVRIQIRMQCQPLLEEQFKPIISKNYYEHRLFWFELDRAQ 157

Query: 220 TSQLFSLFESSPATFRRPLQ 161
           TS+L SLF SSP+  ++ ++
Sbjct: 158 TSKLVSLFSSSPSLSQKTVK 177


>ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246676 [Vitis vinifera]
          Length = 818

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/80 (42%), Positives = 50/80 (62%)
 Frame = -2

Query: 400 LDINPQAWTDDGSEKTKFPAQVRVRIRKQIKFLPEMKYKKVIQKNYIXXXXXXXXXXXRQ 221
           ++INP  WT DGS+ T +PAQVR++IR Q + L E ++K +I KNY             Q
Sbjct: 98  MNINPYGWTPDGSQLTPYPAQVRIQIRMQCQPLLEEQFKPIISKNYYEHRLFWFELDRAQ 157

Query: 220 TSQLFSLFESSPATFRRPLQ 161
           TS+L SLF SSP+  ++ ++
Sbjct: 158 TSKLVSLFSSSPSLSQKTVK 177


>ref|XP_002882708.1| hypothetical protein ARALYDRAFT_478446 [Arabidopsis lyrata subsp.
           lyrata] gi|297328548|gb|EFH58967.1| hypothetical protein
           ARALYDRAFT_478446 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/131 (32%), Positives = 64/131 (48%)
 Frame = -2

Query: 400 LDINPQAWTDDGSEKTKFPAQVRVRIRKQIKFLPEMKYKKVIQKNYIXXXXXXXXXXXRQ 221
           L+I+ +AW+ +G++ T +PAQV+VR+R + + LPE K+  VI +NY             Q
Sbjct: 73  LNIDSKAWSPNGTDPTPYPAQVKVRVRVRCEPLPEEKFSPVISENYKDEKMFWFELDRGQ 132

Query: 220 TSQLFSLFESSPATFRRPLQVSSPRTEGVKLISEEASAEYVTATSGLIAGVDLPTPGTRT 41
           T++L  LF+ SP+  R P  +S                     TS L    DL       
Sbjct: 133 TNKLLRLFKPSPSV-RAPPSISRDAV---------PPPRKPIPTSSLAQIGDLGATRVDK 182

Query: 40  WASLFKETCES 8
           W+SLFK + ES
Sbjct: 183 WSSLFKSSDES 193


>emb|CBI18099.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
 Frame = -2

Query: 400 LDINPQAWTDDGSEKTKFPAQVRVRIRKQIKFLPEMKYKKVIQKNYIXXXXXXXXXXXRQ 221
           ++INP  WT DG+E+T +PAQV++R+R Q + LPE +++ +I  NY             Q
Sbjct: 106 MNINPYGWTTDGAERTLYPAQVQIRVRLQCQPLPEEQFRPIIADNYYSQSHFWFELDHAQ 165

Query: 220 TSQLFSLFESSPA--------------TFRRPLQVSSPRTEGVKLISEEASAE 104
            S+L SL  S                 T  RPL + + + E    +  EAS++
Sbjct: 166 ASKLISLLSSRAVAPSASVPQNSAAWRTLFRPLPLCNKKEEDESNLPLEASSD 218


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