BLASTX nr result

ID: Coptis21_contig00036011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036011
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor prot...   103   2e-29
ref|XP_002533279.1| serine-threonine protein kinase, plant-type,...   100   2e-25
ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine...    91   1e-24
ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|2...    90   1e-23
ref|XP_002307830.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-23

>ref|XP_003544429.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
           [Glycine max]
          Length = 636

 Score =  103 bits (256), Expect(2) = 2e-29
 Identities = 43/74 (58%), Positives = 62/74 (83%)
 Frame = +3

Query: 9   SYYTIANNTYQGLSSCNSLVNENAYGERDLLPGFKIAVPLRCACPTSNQITMGTNYLLTY 188
           +Y+T+AN+T++GL++C++L+  N+YGE DLLPG ++ VPLRCACPT +QIT GT YLLTY
Sbjct: 131 TYFTVANDTFEGLTTCDTLMRANSYGELDLLPGMELHVPLRCACPTWHQITNGTKYLLTY 190

Query: 189 SIFWGDNITALSRR 230
           S+ WGD+I  ++ R
Sbjct: 191 SVNWGDSIKNIAAR 204



 Score = 50.8 bits (120), Expect(2) = 2e-29
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +2

Query: 224 SEINVSRKNMLDANGFHEDYPTIFPFTTILIPLPAEP 334
           +  NV+  N++DANGF     TIFPFTT+LIPLP+EP
Sbjct: 203 ARFNVAAGNVVDANGFSTQTQTIFPFTTVLIPLPSEP 239


>ref|XP_002533279.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223526904|gb|EEF29111.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 617

 Score =  100 bits (248), Expect(2) = 2e-25
 Identities = 44/75 (58%), Positives = 57/75 (76%)
 Frame = +3

Query: 6   DSYYTIANNTYQGLSSCNSLVNENAYGERDLLPGFKIAVPLRCACPTSNQITMGTNYLLT 185
           D+Y++IA +TY+GLS+CNSL+ +N Y E  L  G ++ VPLRCACPTSNQ   GT YLLT
Sbjct: 128 DTYFSIAESTYEGLSTCNSLMRQNNYSEFSLDVGMELRVPLRCACPTSNQSANGTKYLLT 187

Query: 186 YSIFWGDNITALSRR 230
           YS+ WGD + A+S R
Sbjct: 188 YSVSWGDKVRAVSER 202



 Score = 40.8 bits (94), Expect(2) = 2e-25
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +2

Query: 233 NVSRKNMLDANGFHEDYPTIFPFTTILIPLPAEP 334
           N S  ++  ANGF +D  T+FPFTTIL+PL  EP
Sbjct: 204 NASIDSVNYANGFTKDDTTLFPFTTILVPLSTEP 237


>ref|XP_002281880.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Vitis vinifera]
          Length = 622

 Score = 90.5 bits (223), Expect(2) = 1e-24
 Identities = 40/74 (54%), Positives = 50/74 (67%)
 Frame = +3

Query: 9   SYYTIANNTYQGLSSCNSLVNENAYGERDLLPGFKIAVPLRCACPTSNQITMGTNYLLTY 188
           +Y+ I NNTYQGLS+C+SL+  N Y E  L PG ++ VPLRCAC T +Q   GT YLLTY
Sbjct: 129 TYFIIGNNTYQGLSTCDSLMRANRYSEFSLSPGLELHVPLRCACHTEHQAENGTKYLLTY 188

Query: 189 SIFWGDNITALSRR 230
           S+ W DN   +  R
Sbjct: 189 SVSWEDNFPTIGER 202



 Score = 47.8 bits (112), Expect(2) = 1e-24
 Identities = 24/35 (68%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
 Frame = +2

Query: 233 NVSRKNMLDANGF-HEDYPTIFPFTTILIPLPAEP 334
           NVS K++ DANG   E+ PTIFPFTTILIPL  EP
Sbjct: 204 NVSAKSIADANGLISEENPTIFPFTTILIPLKTEP 238


>ref|XP_002326901.1| predicted protein [Populus trichocarpa] gi|222835216|gb|EEE73651.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 90.1 bits (222), Expect(2) = 1e-23
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = +3

Query: 9   SYYTIANNTYQGLSSCNSLVNENAYGERDLLPGFKIAVPLRCACPTSNQITMGTNYLLTY 188
           +YY IAN TY+GLS+C +L + N +GE DLLPG ++ VPLRCACPT+NQ+  GT YL+TY
Sbjct: 129 TYYVIANETYEGLSTCAALKHLNIHGEYDLLPGEELQVPLRCACPTTNQMIRGTKYLVTY 188

Query: 189 SIFWGDNITALSRR 230
            +   DNI  ++ R
Sbjct: 189 PLSSDDNIPDIADR 202



 Score = 44.7 bits (104), Expect(2) = 1e-23
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = +2

Query: 236 VSRKNMLDANGFHEDYPTIFPFTTILIPLPAEP 334
           VS K++LDANG  E+ PT++P TTILIPLP +P
Sbjct: 205 VSTKDILDANGMEEN-PTLYPDTTILIPLPTQP 236


>ref|XP_002307830.1| predicted protein [Populus trichocarpa] gi|222857279|gb|EEE94826.1|
           predicted protein [Populus trichocarpa]
          Length = 659

 Score = 99.0 bits (245), Expect(2) = 2e-23
 Identities = 39/74 (52%), Positives = 61/74 (82%)
 Frame = +3

Query: 6   DSYYTIANNTYQGLSSCNSLVNENAYGERDLLPGFKIAVPLRCACPTSNQITMGTNYLLT 185
           ++Y+++ANNTYQGL++C SL+++N YG+R+L  G  + +PLRCACPTSNQ   G N+LLT
Sbjct: 136 ETYFSVANNTYQGLTTCQSLMSQNPYGDRNLSLGLTLQIPLRCACPTSNQNASGINHLLT 195

Query: 186 YSIFWGDNITALSR 227
           Y + WGD+I+++++
Sbjct: 196 YMVTWGDSISSIAQ 209



 Score = 34.7 bits (78), Expect(2) = 2e-23
 Identities = 17/33 (51%), Positives = 21/33 (63%)
 Frame = +2

Query: 236 VSRKNMLDANGFHEDYPTIFPFTTILIPLPAEP 334
           V ++ +LDAN        IFPFT IL+PLP EP
Sbjct: 213 VDKQRVLDANKLSSSN-IIFPFTPILVPLPTEP 244


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