BLASTX nr result

ID: Coptis21_contig00035980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035980
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19761.3| unnamed protein product [Vitis vinifera]              105   3e-21
ref|XP_002464628.1| hypothetical protein SORBIDRAFT_01g022060 [S...   105   3e-21
ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methy...   105   3e-21
gb|AAV64189.1| hypothetical protein F9002 [Zea mays]                  104   7e-21
gb|AAV64227.1| hypothetical protein F9002 [Zea mays]                  104   7e-21

>emb|CBI19761.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = +2

Query: 2   GSLKSGLYLVATPIGNLEDITFRALRVLKSANVILSEDTRHSGKLLQHYNIKTPLLSF 175
           G LK GLYLV TPIGNLEDITFRALRVL+SANVILSEDTRHSGKLLQHY+IKTPLLS+
Sbjct: 85  GHLKPGLYLVGTPIGNLEDITFRALRVLRSANVILSEDTRHSGKLLQHYDIKTPLLSY 142


>ref|XP_002464628.1| hypothetical protein SORBIDRAFT_01g022060 [Sorghum bicolor]
           gi|241918482|gb|EER91626.1| hypothetical protein
           SORBIDRAFT_01g022060 [Sorghum bicolor]
          Length = 336

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/56 (94%), Positives = 54/56 (96%)
 Frame = +2

Query: 8   LKSGLYLVATPIGNLEDITFRALRVLKSANVILSEDTRHSGKLLQHYNIKTPLLSF 175
           L+SGLYLVATPIGNLEDIT RALRVLK ANVILSEDTRHSGKLLQHYNIKTPLLSF
Sbjct: 58  LESGLYLVATPIGNLEDITLRALRVLKCANVILSEDTRHSGKLLQHYNIKTPLLSF 113


>ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
           [Vitis vinifera]
          Length = 351

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = +2

Query: 2   GSLKSGLYLVATPIGNLEDITFRALRVLKSANVILSEDTRHSGKLLQHYNIKTPLLSF 175
           G LK GLYLV TPIGNLEDITFRALRVL+SANVILSEDTRHSGKLLQHY+IKTPLLS+
Sbjct: 62  GHLKPGLYLVGTPIGNLEDITFRALRVLRSANVILSEDTRHSGKLLQHYDIKTPLLSY 119


>gb|AAV64189.1| hypothetical protein F9002 [Zea mays]
          Length = 337

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = +2

Query: 8   LKSGLYLVATPIGNLEDITFRALRVLKSANVILSEDTRHSGKLLQHYNIKTPLLSF 175
           L+SGLYLV+TPIGNLEDIT RALRVLK ANVILSEDTRHSGKLLQHYNIKTPLLSF
Sbjct: 45  LESGLYLVSTPIGNLEDITLRALRVLKCANVILSEDTRHSGKLLQHYNIKTPLLSF 100


>gb|AAV64227.1| hypothetical protein F9002 [Zea mays]
          Length = 337

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/56 (92%), Positives = 54/56 (96%)
 Frame = +2

Query: 8   LKSGLYLVATPIGNLEDITFRALRVLKSANVILSEDTRHSGKLLQHYNIKTPLLSF 175
           L+SGLYLV+TPIGNLEDIT RALRVLK ANVILSEDTRHSGKLLQHYNIKTPLLSF
Sbjct: 45  LESGLYLVSTPIGNLEDITLRALRVLKCANVILSEDTRHSGKLLQHYNIKTPLLSF 100


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