BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035975
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Gly...   113   1e-23
ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Gly...   113   1e-23
ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_003637393.1| MutS2 family protein [Medicago truncatula] g...   108   6e-22
ref|XP_002519048.1| DNA mismatch repair protein muts2, putative ...   106   2e-21

>ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
          Length = 902

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/71 (77%), Positives = 63/71 (88%)
 Frame = -1

Query: 215 RKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCVGIRASHRSLLPDGVILNASSS 36
           RK+N+  L+SL KE+S++IFQAGGID PLI  RRSRMCVGIRASHR LLPDGV+LN SSS
Sbjct: 199 RKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRYLLPDGVVLNVSSS 258

Query: 35  GATYFMEPRDA 3
           GATYFMEP+DA
Sbjct: 259 GATYFMEPKDA 269


>ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
          Length = 914

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/71 (77%), Positives = 63/71 (88%)
 Frame = -1

Query: 215 RKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCVGIRASHRSLLPDGVILNASSS 36
           RK+N+  L+SL KE+S++IFQAGGID PLI  RRSRMCVGIRASHR LLPDGV+LN SSS
Sbjct: 199 RKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCVGIRASHRYLLPDGVVLNVSSS 258

Query: 35  GATYFMEPRDA 3
           GATYFMEP+DA
Sbjct: 259 GATYFMEPKDA 269


>ref|XP_002305805.1| predicted protein [Populus trichocarpa] gi|222848769|gb|EEE86316.1|
           predicted protein [Populus trichocarpa]
          Length = 908

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/71 (71%), Positives = 60/71 (84%)
 Frame = -1

Query: 215 RKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCVGIRASHRSLLPDGVILNASSS 36
           RK+NM NL+ L K IS +IFQAGGID PL+T RRSR+CVG+RASHR L+PDGV+LN SSS
Sbjct: 209 RKRNMENLDRLLKGISARIFQAGGIDKPLVTKRRSRLCVGVRASHRYLIPDGVVLNVSSS 268

Query: 35  GATYFMEPRDA 3
           G TYFMEP +A
Sbjct: 269 GVTYFMEPGEA 279


>ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
           gi|355503328|gb|AES84531.1| MutS2 family protein
           [Medicago truncatula]
          Length = 913

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/71 (71%), Positives = 64/71 (90%)
 Frame = -1

Query: 215 RKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCVGIRASHRSLLPDGVILNASSS 36
           RK+N+  L+SL KE+S++IF+AGGID P IT RRSRMCVGIRAS+R LLP+G++LNASSS
Sbjct: 198 RKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCVGIRASYRYLLPEGIVLNASSS 257

Query: 35  GATYFMEPRDA 3
           GATYFMEP++A
Sbjct: 258 GATYFMEPKEA 268


>ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
           gi|223541711|gb|EEF43259.1| DNA mismatch repair protein
           muts2, putative [Ricinus communis]
          Length = 873

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/71 (70%), Positives = 60/71 (84%)
 Frame = -1

Query: 215 RKKNMNNLESLSKEISTKIFQAGGIDTPLITIRRSRMCVGIRASHRSLLPDGVILNASSS 36
           RKK M NL++L K IST+IFQAGGID P +T RRSR+CVG+RA+HR L+PDGVIL+ S S
Sbjct: 208 RKKTMENLDNLLKGISTRIFQAGGIDRPFVTKRRSRLCVGVRATHRYLIPDGVILDVSGS 267

Query: 35  GATYFMEPRDA 3
           GATYF+EP DA
Sbjct: 268 GATYFVEPGDA 278