BLASTX nr result

ID: Coptis21_contig00035871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035871
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332472.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_003615299.1| Kinesin-like protein [Medicago truncatula] g...   144   1e-32
ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF...   142   3e-32
emb|CBI19268.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF...   141   6e-32

>ref|XP_002332472.1| predicted protein [Populus trichocarpa] gi|222832555|gb|EEE71032.1|
           predicted protein [Populus trichocarpa]
          Length = 1229

 Score =  144 bits (363), Expect = 7e-33
 Identities = 81/110 (73%), Positives = 87/110 (79%), Gaps = 11/110 (10%)
 Frame = -1

Query: 311 FLIRVAFNEIFKEEVFDLLE-----------VSATKVRGHKTCPIQIRETANGGITLAGV 165
           FLIRV+F EIFKEEVFDLL+           V+A K       PIQIRETANGGITLAGV
Sbjct: 129 FLIRVSFIEIFKEEVFDLLDPNSAAFSKGEWVNAAKPAVPSRVPIQIRETANGGITLAGV 188

Query: 164 TEPEVRTKEEMAAYLSRGSLSRATGSTNMNSQSSRSHAIFTISMEQKRSS 15
           TE EVR KEEMA+YLSRGSLSRATGSTNMNSQSSRSHAIFTI+MEQK+ S
Sbjct: 189 TEAEVRNKEEMASYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQKKIS 238


>ref|XP_003615299.1| Kinesin-like protein [Medicago truncatula]
           gi|355516634|gb|AES98257.1| Kinesin-like protein
           [Medicago truncatula]
          Length = 1273

 Score =  144 bits (362), Expect = 1e-32
 Identities = 78/106 (73%), Positives = 88/106 (83%), Gaps = 10/106 (9%)
 Frame = -1

Query: 311 FLIRVAFNEIFKEEVFDLLEVSATKVRGHKTC----------PIQIRETANGGITLAGVT 162
           FLIRV+F EIFKEEVFDLL+ +A+K  G   C          PIQIRET +GGITLAGVT
Sbjct: 141 FLIRVSFIEIFKEEVFDLLDPNASK--GESVCNAKFAAPARVPIQIRETLSGGITLAGVT 198

Query: 161 EPEVRTKEEMAAYLSRGSLSRATGSTNMNSQSSRSHAIFTISMEQK 24
           EPEV+TKEEM++YLSRGS+SRATGSTNMNSQSSRSHAIFTI+MEQK
Sbjct: 199 EPEVKTKEEMSSYLSRGSMSRATGSTNMNSQSSRSHAIFTITMEQK 244


>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
          Length = 1261

 Score =  142 bits (358), Expect = 3e-32
 Identities = 79/111 (71%), Positives = 86/111 (77%), Gaps = 11/111 (9%)
 Frame = -1

Query: 311 FLIRVAFNEIFKEEVFDLLE-----------VSATKVRGHKTCPIQIRETANGGITLAGV 165
           FLIRV+F EIFKEEVFDLL+           V  TK  G    PIQIRET +GGITLAGV
Sbjct: 131 FLIRVSFIEIFKEEVFDLLDPNSSATSKVEGVCVTKPTGPARVPIQIRETVSGGITLAGV 190

Query: 164 TEPEVRTKEEMAAYLSRGSLSRATGSTNMNSQSSRSHAIFTISMEQKRSSR 12
           TE EVRTKEEMA+YLS GS +RATGSTNMNSQSSRSHAIFTISMEQK+ +R
Sbjct: 191 TEAEVRTKEEMASYLSHGSTARATGSTNMNSQSSRSHAIFTISMEQKKIAR 241


>emb|CBI19268.3| unnamed protein product [Vitis vinifera]
          Length = 1279

 Score =  142 bits (358), Expect = 3e-32
 Identities = 79/111 (71%), Positives = 86/111 (77%), Gaps = 11/111 (9%)
 Frame = -1

Query: 311 FLIRVAFNEIFKEEVFDLLE-----------VSATKVRGHKTCPIQIRETANGGITLAGV 165
           FLIRV+F EIFKEEVFDLL+           V  TK  G    PIQIRET +GGITLAGV
Sbjct: 152 FLIRVSFIEIFKEEVFDLLDPNSSATSKVEGVCVTKPTGPARVPIQIRETVSGGITLAGV 211

Query: 164 TEPEVRTKEEMAAYLSRGSLSRATGSTNMNSQSSRSHAIFTISMEQKRSSR 12
           TE EVRTKEEMA+YLS GS +RATGSTNMNSQSSRSHAIFTISMEQK+ +R
Sbjct: 212 TEAEVRTKEEMASYLSHGSTARATGSTNMNSQSSRSHAIFTISMEQKKIAR 262


>ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
          Length = 1299

 Score =  141 bits (355), Expect = 6e-32
 Identities = 77/104 (74%), Positives = 83/104 (79%), Gaps = 8/104 (7%)
 Frame = -1

Query: 311 FLIRVAFNEIFKEEVFDLLE--------VSATKVRGHKTCPIQIRETANGGITLAGVTEP 156
           FLIRV+F EIFKEEVFDLL+         S  K       PIQIRET NGGITLAGVTE 
Sbjct: 131 FLIRVSFIEIFKEEVFDLLDPNSARGDMASTAKPAAPSRVPIQIRETVNGGITLAGVTEA 190

Query: 155 EVRTKEEMAAYLSRGSLSRATGSTNMNSQSSRSHAIFTISMEQK 24
           EV+TKEEM++YLSRGSLSRATGSTNMNSQSSRSHAIFTI+MEQK
Sbjct: 191 EVKTKEEMSSYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQK 234


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