BLASTX nr result

ID: Coptis21_contig00035796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035796
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002326676.1| predicted protein [Populus trichocarpa] gi|222833998|gb|EEE72475.1|
           predicted protein [Populus trichocarpa]
          Length = 1224

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/54 (51%), Positives = 35/54 (64%)
 Frame = -3

Query: 229 RDDDSLDLIFTFLWSFSHKVILSKHFDLDSETGAEICLAAYEALVPVLKAVASS 68
           + D  L  ++ FLW F  K + S     DSE GAEICLAAYEAL PVL+A+ S+
Sbjct: 348 KSDVKLSSVWNFLWKFFWKTVSSP--TCDSEAGAEICLAAYEALAPVLRALVST 399


Top