BLASTX nr result

ID: Coptis21_contig00035747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00035747
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                      106   2e-21
emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]   102   4e-20
emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]   102   4e-20
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   100   9e-20
emb|CAN65716.1| hypothetical protein VITISV_015039 [Vitis vinifera]   100   1e-19

>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/72 (69%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = -2

Query: 216  LDVKGYIDADWAGSITDRRSIAGYFTFIGG-YFTWRSKKQAVVALSSAESEFTGMAKAIF 40
            LDV GY DADWAGSITDRRS +GYFTF+GG   TW+SKKQ VVA SSAE+E+ GMA+ + 
Sbjct: 1020 LDVSGYTDADWAGSITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSSAEAEYRGMARGLC 1079

Query: 39   ELLWIQNLLEDL 4
            E+LW++NLL DL
Sbjct: 1080 EMLWLRNLLNDL 1091


>emb|CAN66301.1| hypothetical protein VITISV_029373 [Vitis vinifera]
          Length = 1041

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = -2

Query: 216  LDVKGYIDADWAGSITDRRSIAGYFTFIGGYF-TWRSKKQAVVALSSAESEFTGMAKAIF 40
            L+V GYIDADWAG+ITD +S +GYFTF+GG   TWRSKKQ VVALSSAE+EF GM K I 
Sbjct: 881  LNVAGYIDADWAGNITDMKSTSGYFTFVGGNLVTWRSKKQKVVALSSAEAEFQGMVKGIC 940

Query: 39   ELLWIQNLLEDL 4
            ELLW++ LL ++
Sbjct: 941  ELLWLKKLLAEI 952


>emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
          Length = 1625

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/72 (68%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
 Frame = -2

Query: 216  LDVKGYIDADWAGSITDRRSIAGYFTFIGGYF-TWRSKKQAVVALSSAESEFTGMAKAIF 40
            L V GY DADWAG+ITDR+S AGYFTF+GG   TWRSKKQ VVALSSAE+EF GM K I 
Sbjct: 1207 LKVAGYTDADWAGNITDRKSTAGYFTFVGGNLVTWRSKKQKVVALSSAEAEFRGMVKGIC 1266

Query: 39   ELLWIQNLLEDL 4
            EL+W++ LL ++
Sbjct: 1267 ELIWLKKLLAEI 1278


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 2260

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/72 (70%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
 Frame = -2

Query: 216  LDVKGYIDADWAGSITDRRSIAGYFTFIGGYF-TWRSKKQAVVALSSAESEFTGMAKAIF 40
            L V+GY DADWAGS  DR+S AGY TF+GG   TWRSKKQ VVA SSAE+EF GMA  I 
Sbjct: 1781 LKVEGYTDADWAGSADDRKSTAGYLTFVGGNLVTWRSKKQQVVARSSAEAEFRGMAVGIC 1840

Query: 39   ELLWIQNLLEDL 4
            ELLWI+NLL+DL
Sbjct: 1841 ELLWIKNLLKDL 1852


>emb|CAN65716.1| hypothetical protein VITISV_015039 [Vitis vinifera]
          Length = 829

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/72 (66%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = -2

Query: 216 LDVKGYIDADWAGSITDRRSIAGYFTFIGGYF-TWRSKKQAVVALSSAESEFTGMAKAIF 40
           L V+GY DADWAG+I DR+S +GYFTF+GG   TWRSKKQ VVALSSAE+EF GMAK + 
Sbjct: 669 LRVEGYTDADWAGNIMDRKSTSGYFTFVGGNLVTWRSKKQKVVALSSAEAEFRGMAKGLC 728

Query: 39  ELLWIQNLLEDL 4
           ELLW++ LL ++
Sbjct: 729 ELLWLRRLLTEI 740


Top